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sw_4_scaffold_2061

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2061_1
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..2771)
DNA (2769bp) protein (923aa)
Thrombospondin type 3 repeat family protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JMN8_9EURY
Thrombospondin type 3 repeat family protein {ECO:0000313|EMBL:EMA09598.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
AAA ATPase containing von Willebrand factor type A (vWA) domain
sw_4_scaffold_2061_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3154..3393)
DNA (240bp) protein (80aa)
Ferredoxin (4Fe-4S) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU42_NATM8
ferC; ferredoxin (4Fe-4S)
Ferredoxin (4Fe-4S) {ECO:0000313|EMBL:CCQ38045.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_4_scaffold_2061_3
unknown

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comp(3470..3889)
DNA (420bp) protein (140aa)

This feature has no annotations

sw_4_scaffold_2061_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4621..5772
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JE53_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58066.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
peptidase S45 penicillin amidase
sw_4_scaffold_2061_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5769..6164
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EUJ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58067.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_4_scaffold_2061_6

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comp(6116..7087)
DNA (972bp) protein (324aa)
Putative ornithine cyclodeaminase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XQX9_9ARCH
Putative ornithine cyclodeaminase {ECO:0000313|EMBL:ESS04548.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
putative ornithine cyclodeaminase, mu-crystallin
sw_4_scaffold_2061_7
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7183..8343
DNA (1161bp) protein (387aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I9V4_HALRX
glycine/D-amino acid oxidase, deaminating
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:AGB15021.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (
sw_4_scaffold_2061_8
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8404..9108
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JPE4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA09530.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_4_scaffold_2061_9
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9261..9632)
DNA (372bp) protein (124aa)
HTR-like protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CL55_9EURY
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AGB30142.1}; PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELY69848.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialba
sw_4_scaffold_2061_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9580..11643)
DNA (2064bp) protein (688aa)
PAS sensor histidine kinase n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PHZ0_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERG91781.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J0
signal-transducing histidine kinase / response regulator
sw_4_scaffold_2061_11
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11732..12205)
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH02740.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
Uncharacterized protein id=24620824 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
sw_4_scaffold_2061_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12791..14356
DNA (1566bp) protein (522aa)
hel308a; ATP-dependent DNA helicase Hel308 (EC:3.6.4.12)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Putative ski2-type helicase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU08_NATM8
sw_4_scaffold_2061_13
unknown

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comp(14332..14862)
DNA (531bp) protein (177aa)

This feature has no annotations

sw_4_scaffold_2061_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15861..17459
DNA (1599bp) protein (533aa)
polA1; DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=348780 species="Archaea; Euryar
DNA-directed DNA polymerase D exonuclease subunit DP1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU51_NATPD
sw_4_scaffold_2061_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17645..17806
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU52_NATPD
polA cluster protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48331.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_2061_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17870..18055
DNA (186bp) protein (62aa)
PolA operon protein (DNA-binding protein); K06934 id=24648489 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative PD1-like DNA-binding protein {ECO:0000313|EMBL:ERH09620.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DUF296 family protein
Displaying 16 items

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