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sw_4_scaffold_3117

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_3117_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..197)
DNA (195bp) protein (65aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=795797 species="Arc
Inorganic pyrophosphatase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8G3_HALJB
inorganic pyrophosphatase
sw_4_scaffold_3117_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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414..773
DNA (360bp) protein (120aa)
Transcription regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHG6_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ22740.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
PadR family transcriptional regulator
sw_4_scaffold_3117_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(800..1444)
DNA (645bp) protein (215aa)
hypothetical protein id=24644682 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH08896.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_4_scaffold_3117_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1437..1766)
DNA (330bp) protein (110aa)
Ribonuclease H n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMS0_HALUD
ribonuclease H
Ribonuclease H {ECO:0000313|EMBL:ACV11383.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain DSM 12
sw_4_scaffold_3117_5
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1763..1996)
DNA (234bp) protein (78aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WNW3_9EURY
Ribonuclease H {ECO:0000313|EMBL:ELY51154.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JCM
sw_4_scaffold_3117_6
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2175..3062
DNA (888bp) protein (296aa)
Transcription initiation factor IIB n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XRN1_9EURY
transcription initiation factor TFB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_4_scaffold_3117_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3175..3570)
DNA (396bp) protein (132aa)
UspA domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQQ8_NATM8
Universal stress protein {ECO:0000313|EMBL:AHG03421.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
UspA domain protein
sw_4_scaffold_3117_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3770..3973
DNA (204bp) protein (68aa)
Putative transcriptional regulator, CopG/Arc/MetJ family protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBS9_9EURY
CopG family transcriptional regulator {ECO:0000313|EMBL:AHG02560.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacteri
CopG family transcriptional regulator
sw_4_scaffold_3117_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3960..4667
DNA (708bp) protein (236aa)
putative transporter id=24645000 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Conserved hypothetical integral membrane protein {ECO:0000313|EMBL:ERH09213.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative transporter
sw_4_scaffold_3117_10
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4681..5130)
DNA (450bp) protein (150aa)
Acetyltransferase, gnat family protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AHH6_NATA1
Acetyltransferase, gnat family protein {ECO:0000313|EMBL:ELY98140.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (s
hypothetical protein
sw_4_scaffold_3117_11
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5164..6174)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TUS8_9EURY
Hydrogenase isoenzymes formation protein HypE {ECO:0000313|EMBL:CQR53514.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
hmf; hydrogenase expression/formation protein
Displaying 11 items

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