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sw_4_scaffold_3994

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_3994_1
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..484
DNA (483bp) protein (161aa)
Adenosylcobinamide amidohydrolase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NY22_9EURY
Adenosylcobinamide amidohydrolase {ECO:0000313|EMBL:EMA62827.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JC
hypothetical protein
sw_4_scaffold_3994_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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481..1191
DNA (711bp) protein (237aa)
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D509_9EURY
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP {ECO:0000313|EMBL:ELZ30566.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Ha
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
sw_4_scaffold_3994_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1748..2860)
DNA (1113bp) protein (371aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1085028 species="Archaea; Euryarc
Leucyl-tRNA synthetase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKI7_9EURY
Suspect SCG annotation. See neighboring gene [sw_4_scaffold_3994_4].
leucyl-tRNA synthetase
sw_4_scaffold_3994_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2809..4449)
DNA (1641bp) protein (547aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=24646791 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1085028 species="Archaea; Euryarc
leuS; leucyl-tRNA ligase (EC:6.1.1.4)
sw_4_scaffold_3994_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4511..6331)
DNA (1821bp) protein (607aa)
HTR-like protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W913_9EURY
HTR-like protein
HTR-like protein {ECO:0000313|EMBL:AGN02258.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_4_scaffold_3994_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6606..8165
DNA (1560bp) protein (520aa)
fibronectin-binding A domain-containing protein id=24646271 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative eukaryotic snRNP-like RNA-binding protein {ECO:0000313|EMBL:ERH10452.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
fibronectin-binding A domain-containing protein
sw_4_scaffold_3994_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8540..9556
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KYH3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA25898.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_4_scaffold_3994_8

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9650..10726
DNA (1077bp) protein (359aa)
aceA; isocitrate lyase (EC:4.1.3.1)
PEP phosphonomutase related enzyme n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0P7_9ARCH
PEP phosphonomutase related enzyme {ECO:0000313|EMBL:ESS04497.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_4_scaffold_3994_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10836..12071
DNA (1236bp) protein (412aa)
aceB; malate synthase (EC:2.3.3.9)
Malate synthase {ECO:0000313|EMBL:CCQ36525.1}; EC=2.3.3.9 {ECO:0000313|EMBL:CCQ36525.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;"
Malate synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQT9_NATM8
sw_4_scaffold_3994_10
unknown

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comp(12191..12367)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 10 items

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