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sw_4_scaffold_6573

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_6573_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..187
DNA (186bp) protein (62aa)
DUF35 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSS5_NATM8
DUF35 family protein
DUF35 family protein {ECO:0000313|EMBL:CCQ37443.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (str
sw_4_scaffold_6573_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(256..930)
DNA (675bp) protein (225aa)
Uncharacterized protein id=24644395 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH08620.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_4_scaffold_6573_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1263..2567
DNA (1305bp) protein (435aa)
dinB; DNA polymerase IV (EC:2.7.7.7) id=24645401 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1085028 species="Archaea; Euryarchaeota; Halo
dinB; DNA polymerase IV (EC:2.7.7.7)
sw_4_scaffold_6573_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2620..3285
DNA (666bp) protein (222aa)
Transcriptional regulator, TrmB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB9_HALMD
TrmB family transcriptional regulator
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ACV48353.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_4_scaffold_6573_5
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3334..3846
DNA (513bp) protein (171aa)
Cytidyltransferase-related domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRF3_HALUD
phosphopantetheine adenylyltransferase
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:ACV10590.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
sw_4_scaffold_6573_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3847..4182)
DNA (336bp) protein (112aa)
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIY9_9EURY
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB {ECO:0000313|EMBL:ERH10074.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;
tfbA_4; transcription initiation factor TFB 4
sw_4_scaffold_6573_trna_1
unknown

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4237..4321
DNA (85bp)
transferRNA
sw_4_scaffold_6573_7
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4525..5157
DNA (633bp) protein (211aa)
Site-specific recombinase xerd n=3 Tax=Haloferax RepID=M0FL03_9EURY
Tyrosine recombinase XerC {ECO:0000313|EMBL:CQR49831.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
site-specific recombinase xerd
Displaying 8 items

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