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sw_4_scaffold_1227

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1227_1
unknown

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152..310
DNA (159bp) protein (53aa)

This feature has no annotations

sw_4_scaffold_1227_2
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(347..1414)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLA6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA19544.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_4_scaffold_1227_3
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1516..2460
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WS97_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY52307.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_4_scaffold_1227_4
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2596..2901
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VSF7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00145.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_4_scaffold_1227_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2898..3353
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VV51_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00146.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_4_scaffold_1227_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3461..4003
DNA (543bp) protein (181aa)
Polyhydroxyalkanoate synthase III subunit E n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W2U0_9EURY
polyhydroxyalkanoate synthase III subunit E
Polyhydroxyalkanoate synthase III subunit E {ECO:0000313|EMBL:AGN00147.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarcha
sw_4_scaffold_1227_7
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4000..5322
DNA (1323bp) protein (441aa)
Poly(3-hydroxyalkanoate) synthase subunit PhaC n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0I0P2_9EURY
Poly(R)-hydroxyalkanoic acid synthase subunit PhaC {ECO:0000313|EMBL:KDE59352.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Ha
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
sw_4_scaffold_1227_8
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5449..6438
DNA (990bp) protein (330aa)
Putative patatin-like phospholipase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RBH0_HALMT
rssA; patatin-like phospholipase
Patatin {ECO:0000313|EMBL:AHZ24372.1}; Putative patatin-like phospholipase {ECO:0000313|EMBL:AFK21580.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
sw_4_scaffold_1227_trna_1
unknown

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comp(6656..6727)
DNA (72bp)
transferRNA
sw_4_scaffold_1227_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6896..7837
DNA (942bp) protein (314aa)
Spermidine/putrescine ABC transporter spermidine/putrescine binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JNC9_HALVA
Spermidine/putrescine ABC transporter spermidine/putrescine binding protein {ECO:0000313|EMBL:EMA09464.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
potD2; spermidine/putrescine ABC transporter spermidine/putrescine binding protein
sw_4_scaffold_1227_10
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7834..8403
DNA (570bp) protein (190aa)
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0M6_9EURY
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA25550.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" so
potA2; ABC-type transport system ATP-binding protein (probable substrate spermidine/putrescine)
sw_4_scaffold_1227_11
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8400..9716
DNA (1317bp) protein (439aa)
Spermidine/putrescine ABC transporter permease protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UYN3_HALMA
potB2; spermidine/putrescine ABC transporter permease
Spermidine/putrescine ABC transporter permease protein {ECO:0000313|EMBL:AAV47620.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" sourc
sw_4_scaffold_1227_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9710..10516
DNA (807bp) protein (269aa)
Spermidine/putrescine ABC transporter permease n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UYN2_HALMA
potC2; spermidine/putrescine ABC transporter permease
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:EMA14399.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
sw_4_scaffold_1227_13
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10634..11254)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTV3_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ68258.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
Displaying 14 items

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