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sw_4_scaffold_1361

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1361_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3..530
DNA (528bp) protein (176aa)
l-threonine synthase (EC:4.2.3.1)
L-threonine synthase {ECO:0000313|EMBL:ADQ68240.1}; EC=4.2.3.1 {ECO:0000313|EMBL:ADQ68240.1};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricu
L-threonine synthase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTT5_HALBP
sw_4_scaffold_1361_2
unknown

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comp(410..853)
DNA (444bp) protein (148aa)

This feature has no annotations

sw_4_scaffold_1361_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(948..2216)
DNA (1269bp) protein (423aa)
tiaS; tRNAIle2(CAT)--2-agmatinylcytidine synthetase (EC:6.3.4.-)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSQ7_NATM8
sw_4_scaffold_1361_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2327..3289
DNA (963bp) protein (321aa)
Putative HTH-type transcriptional regulatory protein Hmuk_0846 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0J5_HALMD
XRE family transcriptional regulator
Putative HTH-type transcriptional regulatory protein Hmuk_0846 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomic
sw_4_scaffold_1361_5
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3290..4693)
DNA (1404bp) protein (468aa)
hypothetical protein id=24643023 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
WD40 repeat protein {ECO:0000313|EMBL:ERH12807.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
arylsulfotransferase
sw_4_scaffold_1361_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4805..5065
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVT6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36469.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_4_scaffold_1361_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5130..6356)
DNA (1227bp) protein (409aa)
Potassium channel-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0QTA1_HALJP
TrkA-C domain protein
Potassium channel-like protein {ECO:0000313|EMBL:EMA34269.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
sw_4_scaffold_1361_8
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6457..7614
DNA (1158bp) protein (386aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
Citrate synthase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NXE7_9EURY
sw_4_scaffold_1361_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7617..7958)
DNA (342bp) protein (114aa)
DNA damage-inducible protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DSD4_9EURY
Multidrug transporter MATE {ECO:0000313|EMBL:KKF39281.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
efflux protein, MATE family
sw_4_scaffold_1361_10
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7955..8518)
DNA (564bp) protein (188aa)
DNA damage-inducible protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P0P4_9EURY
DNA damage-inducible protein {ECO:0000313|EMBL:EMA62380.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 149
DNA damage-inducible protein
sw_4_scaffold_1361_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9405..9866)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HU41_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67322.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_4_scaffold_1361_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10027..11043
DNA (1017bp) protein (339aa)
Iron-sulfur protein (4Fe-4S) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKE0_NATM8
iron-sulfur protein (4Fe-4S)
Iron-sulfur protein (4Fe-4S) {ECO:0000313|EMBL:CCQ35723.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapen
Displaying 12 items

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