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sw_4_scaffold_1743

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1743_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..549)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKM6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23178.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_1743_2
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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627..1325
DNA (699bp) protein (233aa)
DNA repair and recombination protein RadB n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XAI3_9EURY
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350, ECO:0000313|EMBL:ELY57613.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natr
radB; DNA repair and recombination protein RadB
sw_4_scaffold_1743_3
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1780..2259
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKT2_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB32145.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_4_scaffold_1743_4
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2417..2560
DNA (144bp) protein (48aa)
T-RNA-binding domain-containing protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IHC3_9EURY
tRNA-binding protein {ECO:0000313|EMBL:AHG04372.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
EMAP domain-containing protein
sw_4_scaffold_1743_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2813..3901)
DNA (1089bp) protein (363aa)
circadian clock protein KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ACV47775.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ACV47775.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
circadian clock protein, KaiC n=1 Tax=Halomicrobium katesii RepID=UPI00035CC4B9
sw_4_scaffold_1743_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3981..4793
DNA (813bp) protein (271aa)
ppnK_1; NAD(+) kinase 1 (inorganic polyphosphate/ATP-NAD kinase) (EC:2.7.1.23)
NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000255|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; TaxID=348780 species="Archaea; Euryarchaeota;
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PPNK_NATPD
sw_4_scaffold_1743_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4863..5786
DNA (924bp) protein (308aa)
mptA; GTP cyclohydrolase I, archaeal-type (EC:3.5.4.-)
GTP cyclohydrolase MptA {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.39 {ECO:0000256|HAMAP-Rule:MF_01527};; GTP cyclohydrolase IV {ECO:0000256|HAMAP-Rule:MF_01527}; TaxID=268739 species="Archaea; Eurya
GTP cyclohydrolase MptA n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0Q0_NATM8
sw_4_scaffold_1743_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5783..6589)
DNA (807bp) protein (269aa)
TrmB family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR93_NATPD
hypothetical protein
TrmB family transcription regulator {ECO:0000313|EMBL:CAI49350.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas p
sw_4_scaffold_1743_9
unknown

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6649..6777
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 9 items

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