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sw_4_scaffold_2040

Search features with annotation key words

Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2040_1
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..568
DNA (567bp) protein (189aa)
aspC2; pyridoxal phosphate-dependent aminotransferase (probable aspartate aminotransferase) (EC:2.6.1.-)
Aspartate aminotransferase n=2 Tax=Halarchaeum acidiphilum RepID=U2YDP7_9EURY
Aspartate aminotransferase {ECO:0000313|EMBL:GAD51801.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sw_4_scaffold_2040_2
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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647..907
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:AHB68246.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_4_scaffold_2040_3
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1260..2414
DNA (1155bp) protein (385aa)
Lycopene cyclase domain protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PCB4_9EURY
Lycopene cyclase domain protein {ECO:0000313|EMBL:EMA67802.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense J
lycopene cyclase domain protein
sw_4_scaffold_2040_4
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2453..3637)
DNA (1185bp) protein (395aa)
Translation-associated GTPase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JIT4_HALVA
Translation-associated GTPase {ECO:0000313|EMBL:EMA07590.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismorti
ychF; translation-associated GTPase
sw_4_scaffold_2040_5
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3668..4666)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI000381FC81
transferase hexapeptide repeat containing protein
Uncharacterized protein {ECO:0000313|EMBL:AKH97258.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
sw_4_scaffold_2040_6
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4768..4965
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IHN2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR49882.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_4_scaffold_2040_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5180..5314
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA52164.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_4_scaffold_2040_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5407..6177
DNA (771bp) protein (257aa)
Putative methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPZ7_9EURY
Putative methyltransferase {ECO:0000313|EMBL:EMA46814.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
methylase
sw_4_scaffold_2040_9
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6454..7587)
DNA (1134bp) protein (378aa)
Proteasome-activating nucleotidase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y9E5_9EURY
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553, ECO:0000313|EMBL:ELY70286.1}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; P
peptidase
sw_4_scaffold_2040_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7760..8020
DNA (261bp) protein (87aa)
NP1176A family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISN4_NATPD
transcription regulator
NP_1176A family transcription regulator {ECO:0000313|EMBL:CAI48852.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_4_scaffold_2040_11
unknown

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comp(8013..8195)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 11 items

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