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sw_4_scaffold_2480

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2480_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..201
DNA (201bp) protein (67aa)
Iron-sulfur cluster assembly protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITH2_NATPD
nitrogen fixation protein NifU
Iron-sulfur cluster assembly protein {ECO:0000313|EMBL:CAI48561.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_4_scaffold_2480_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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359..1240
DNA (882bp) protein (294aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
2-dehydropantoate 2-reductase n=1 Tax=Halomicrobium katesii RepID=UPI00035C4F6F
sw_4_scaffold_2480_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1268..1594
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6B1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ30232.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_4_scaffold_2480_4
unknown

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comp(1816..2250)
DNA (435bp) protein (145aa)

This feature has no annotations

sw_4_scaffold_2480_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2573..3172
DNA (600bp) protein (200aa)
Homolog to ribonuclease R n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN44_NATM8
homolog to ribonuclease R
Homolog to ribonuclease R {ECO:0000313|EMBL:CCQ35304.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_4_scaffold_2480_6
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3239..4801
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NPB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39737.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_4_scaffold_2480_7

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comp(4867..6087)
DNA (1221bp) protein (407aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C7_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11178.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
sw_4_scaffold_2480_8

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comp(6212..7315)
DNA (1104bp) protein (368aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIM2_9ARCH
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ESS11177.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;
extracellular ligand-binding receptor
sw_4_scaffold_2480_9

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7841..8398
DNA (558bp) protein (186aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=24635988 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ESS11176.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
sw_4_scaffold_2480_10
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8657..9280
DNA (624bp) protein (208aa)
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERH03665.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=24635987 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC transporter
sw_4_scaffold_2480_11

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9277..9996
DNA (720bp) protein (240aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein id=24635986 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11174.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
sw_4_scaffold_2480_12

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10050..11486
DNA (1437bp) protein (479aa)
Acyl-coenzyme A synthetase/AMP-(Fatty) acid ligase n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C4_9ARCH
Acyl-coenzyme A synthetase/AMP-(Fatty) acid ligase {ECO:0000313|EMBL:ESS11173.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
AMP-dependent synthetase and ligase
Displaying 12 items

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