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sw_4_scaffold_3147

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_3147_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..204)
DNA (204bp) protein (68aa)
Ribonuclease H n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0ND61_9EURY
Ribonuclease H {ECO:0000313|EMBL:EMA54615.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;
ribonuclease H
sw_4_scaffold_3147_2
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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666..1019
DNA (354bp) protein (118aa)
Transcription initiation factor IIB n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MFQ5_HALMO
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
Transcription factor TFIIB cyclin-related
sw_4_scaffold_3147_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1057..1476
DNA (420bp) protein (140aa)
Oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N840_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA53743.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Rieske iron sulfur protein
sw_4_scaffold_3147_4
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1553..2854)
DNA (1302bp) protein (434aa)
IS1341-type transposase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PIE3_9EURY
IS1341-type transposase {ECO:0000313|EMBL:EMA69856.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
transposase, IS605 OrfB family, central region
sw_4_scaffold_3147_5
unknown

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3067..3246
DNA (180bp) protein (60aa)

This feature has no annotations

sw_4_scaffold_3147_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3279..4370
DNA (1092bp) protein (364aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=24616750 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1324957 species="Archaea; Eu
histidyl-tRNA synthetase (EC:6.1.1.21)
sw_4_scaffold_3147_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4474..5169
DNA (696bp) protein (232aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8W5_HALJB
sw_4_scaffold_3147_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5325..5999)
DNA (675bp) protein (225aa)
Peptidase M28 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3R6_9EURY
Peptidase M28 {ECO:0000313|EMBL:EMA52188.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
peptidase M28
Displaying 8 items

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