ggKbase home page

sw_4_scaffold_635

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_635_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(111..794)
DNA (684bp) protein (228aa)
S-adenosylmethionine-dependent methyltransferase 3 (EC:2.1.1.-)
Probable S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:CAI50652.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAI50652.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
Probable S-adenosylmethionine-dependent methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMK6_NATPD
sw_4_scaffold_635_2
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(948..1862)
DNA (915bp) protein (305aa)
xthA; endonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KV80_9EURY
sw_4_scaffold_635_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1914..2639)
DNA (726bp) protein (242aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halom
Endonuclease NucS n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ54_HALMD
hypothetical protein
sw_4_scaffold_635_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2676..3233)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPN5_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36007.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_4_scaffold_635_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3284..3691)
DNA (408bp) protein (136aa)
DoxX family protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DHW1_9EURY
DoxX family protein {ECO:0000313|EMBL:ELZ35076.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1
quinol oxidase
sw_4_scaffold_635_6
unknown

Not on your lists

3876..4013
DNA (138bp) protein (46aa)

This feature has no annotations

sw_4_scaffold_635_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4177..4455)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J9F1_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA05601.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein (DUF433)
sw_4_scaffold_635_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4701..5291)
DNA (591bp) protein (197aa)
50S ribosomal protein L15e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL15E_NATPD
rpl15R; 50S ribosomal protein L15e
50S ribosomal protein L15e {ECO:0000255|HAMAP-Rule:MF_00256}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
sw_4_scaffold_635_9
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5444..6352)
DNA (909bp) protein (303aa)
ddh; 2-D-hydroxyacid dehydrogenase (EC:1.1.1.-)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9ZAH2_9EURY
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ELY83404.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;"
sw_4_scaffold_635_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7044..7949)
DNA (906bp) protein (302aa)
pkn1; serine/threonine protein kinase (EC:2.7.11.1); K07179 RIO kinase 2 [EC:2.7.11.1] id=24644972 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Serine/threonine protein kinase {ECO:0000313|EMBL:ERH09188.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
RIO-like serine/threonine protein kinase I
sw_4_scaffold_635_11
unknown

Not on your lists

8214..8597
DNA (384bp) protein (128aa)

This feature has no annotations

sw_4_scaffold_635_12
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8725..9570)
DNA (846bp) protein (282aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IEM1_9EURY
Alpha/beta hydrolase {ECO:0000313|EMBL:AHG03708.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
esterase/lipase
sw_4_scaffold_635_13
unknown

Not on your lists

9668..9901
DNA (234bp) protein (78aa)

This feature has no annotations

sw_4_scaffold_635_14
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9991..10809)
DNA (819bp) protein (273aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
ABC transporter-like protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHR5_9EURY
ABC transporter-like protein
sw_4_scaffold_635_15
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10806..11513)
DNA (708bp) protein (236aa)
Molybdenum ABC transporter permease n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KDT0_9EURY
modB; molybdenum ABC transporter permease
Molybdenum ABC transporter permease protein {ECO:0000313|EMBL:AEM56136.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
sw_4_scaffold_635_16
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11516..12526)
DNA (1011bp) protein (337aa)
Molybdate transport protein n=2 Tax=Haloarcula hispanica RepID=G0HTS5_HALHT
molybdenum transporter
Molybdenum transporter {ECO:0000313|EMBL:AHB64948.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_4_scaffold_635_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12921..13055
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP15_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24990.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_635_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13052..13411
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24991.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_635_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13776..14093
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24991.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
Displaying 19 items

View Taxonomy