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sw_4_scaffold_6528

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_6528_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(298..945)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N359_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51968.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
bacterio-opsin activator
sw_4_scaffold_6528_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1031..1465)
DNA (435bp) protein (145aa)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC09_9EURY
geranylgeranylglyceryl phosphate synthase-like protein
sw_4_scaffold_6528_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1462..1740)
DNA (279bp) protein (93aa)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
Geranylgeranylglyceryl phosphate synthase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0ST09_9EURY
geranylgeranylglyceryl phosphate synthase-like protein
sw_4_scaffold_6528_4
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1855..2052
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S3B2_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB63859.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_4_scaffold_6528_5
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2090..3208
DNA (1119bp) protein (373aa)
Adenosylhomocysteinase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DQZ5_9EURY
Adenosylhomocysteinase {ECO:0000313|EMBL:ELZ36549.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 113
adenosylhomocysteinase
sw_4_scaffold_6528_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3278..3550
DNA (273bp) protein (91aa)
50S ribosomal protein L37Ae n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JE93_HALVA
50S ribosomal protein L37a
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
sw_4_scaffold_6528_7
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3547..3681
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;"
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) id=24655086 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
sw_4_scaffold_6528_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3678..3923
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU60_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92139.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
rpo operon protein
sw_4_scaffold_6528_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4055..4564
DNA (510bp) protein (170aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRI9_HALUD
transcriptional regulator, AsnC family
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV11925.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Hal
sw_4_scaffold_6528_10
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4662..4874
DNA (213bp) protein (71aa)
Heavy metal translocating P-type ATPase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P8J7_9EURY
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EMA66356.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidi
heavy metal translocating P-type ATPase
sw_4_scaffold_6528_11
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4871..7033
DNA (2163bp) protein (721aa)
yvgX; copper-transporting ATPase (EC:3.6.1.-)
Heavy metal translocating P-type ATPase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z040_9EURY
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ELY78523.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum
sw_4_scaffold_6528_12
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7344..7742
DNA (399bp) protein (133aa)
Prefoldin subunit beta n=1 Tax=Halorubrum sp. J07HR59 RepID=U1P2Y8_9EURY
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
pfdB; prefoldin beta subunit
sw_4_scaffold_6528_13
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7749..7991
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9P6_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH37501.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_4_scaffold_6528_14

Not on your lists

comp(8054..8431)
DNA (378bp) protein (126aa)
Putative membrane protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YE44_9ARCH
Putative membrane protein {ECO:0000313|EMBL:ESS11296.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
Displaying 14 items

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