ggKbase home page

sw_4_scaffold_1283

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1283_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2..685
DNA (684bp) protein (228aa)
30S ribosomal protein S3 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFI3_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
30S ribosomal protein S3
sw_4_scaffold_1283_2
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


688..930
DNA (243bp) protein (81aa)
50S ribosomal protein L29P n=2 Tax=Natrinema RepID=I7CWZ6_NATSJ
ribosomal protein L29
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374, ECO:0000313|EMBL:ELY81376.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source
sw_4_scaffold_1283_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

927..1304
DNA (378bp) protein (126aa)
ribonuclease P protein component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9J3_HALJB
sw_4_scaffold_1283_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1295..1765
DNA (471bp) protein (157aa)
30S ribosomal protein S17P n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRQ0_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:EMA35778.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
30S ribosomal protein S17
sw_4_scaffold_1283_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1762..2160
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQD2_9EURY
rpl14; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_4_scaffold_1283_6
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2160..2531
DNA (372bp) protein (124aa)
50S ribosomal protein L24P n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LI22_HALJP
50S ribosomal protein L24
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA11
sw_4_scaffold_1283_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2528..3181
DNA (654bp) protein (218aa)
30S ribosomal protein S4e n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5E4_9EURY
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailanden
30S ribosomal protein S4e
sw_4_scaffold_1283_8
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3188..3760
DNA (573bp) protein (191aa)
50S ribosomal protein L5 n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y243_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 1047
ribosomal protein L5
sw_4_scaffold_1283_9
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3760..3948
DNA (189bp) protein (63aa)
30S ribosomal protein S14 type Z n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VY41_9EURY
rps14P; 30S ribosomal protein S14P
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
sw_4_scaffold_1283_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3956..4348
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS8_NATPD
rps8p; 30S ribosomal protein S8P
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_4_scaffold_1283_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4371..4985
DNA (615bp) protein (205aa)
50S ribosomal protein L6 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9K1_HALJB
rpl6p; 50S ribosomal protein L6P
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus je
sw_4_scaffold_1283_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4975..6063
DNA (1089bp) protein (363aa)
50S ribosomal protein L32e n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8Y2_9EURY
50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000313|EMBL:AGN02183.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bs
sw_4_scaffold_1283_13
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6066..6533
DNA (468bp) protein (156aa)
50S ribosomal protein L19e n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQ71_HALBP
50S ribosomal protein L19e
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bori
sw_4_scaffold_1283_14
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6533..7117
DNA (585bp) protein (195aa)
50S ribosomal protein L18P n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C1J1_9EURY
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" s
50S ribosomal protein L18P/L5E
sw_4_scaffold_1283_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7114..7800
DNA (687bp) protein (229aa)
30S ribosomal protein S5P n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQC1_9EURY
30S ribosomal protein S5P {ECO:0000313|EMBL:EMA35767.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
ribosomal protein S5/S2
sw_4_scaffold_1283_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7800..8264
DNA (465bp) protein (155aa)
50S ribosomal protein L30P n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5K3_9EURY
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rpl30p; 50S ribosomal protein L30
sw_4_scaffold_1283_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8345..8647
DNA (303bp) protein (101aa)
50S ribosomal protein L15P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUQ5_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
50S ribosomal protein L15
Displaying 17 items

View Taxonomy