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sw_4_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_56_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

1..729
DNA (729bp) protein (243aa)
Sigma-70 region 4 type 2 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TR98_9CHLR
Sigma-70 region 4 type 2 {ECO:0000313|EMBL:EFH87797.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter race
transposase
sw_4_scaffold_56_2
RLO_PLX_64_10, Bacteria

Not on your lists

859..4716
DNA (3858bp) protein (1286aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
sw_4_scaffold_56_3
unknown

Not on your lists

4758..4928
DNA (171bp) protein (57aa)

This feature has no annotations

sw_4_scaffold_56_4
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5808..7175
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T5A7_MICAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL43762.1}; Flags: Precursor;; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospor
sw_4_scaffold_56_5
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

7581..8345
DNA (765bp) protein (255aa)
Marine sediment metagenome DNA, contig: S03H2_S14188 Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
sw_4_scaffold_56_6
GWC2_OP11_47_9_partial, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

8376..10097
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI00037E9ABF
Uncharacterized protein {ECO:0000313|EMBL:KKU88040.1}; Flags: Fragment;; TaxID=1618373 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWC2_47_9.;"
parallel beta-helix repeat-containing protein
sw_4_scaffold_56_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10709..11155
DNA (447bp) protein (149aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW26_SALRM
Transposase
Transposase {ECO:0000313|EMBL:CBH22855.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
sw_4_scaffold_56_8
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11399..13147
DNA (1749bp) protein (583aa)
sulfatase (EC:3.1.6.-)
Sulfatase, family S1-17 {ECO:0000313|EMBL:CAZ97290.1}; EC=3.1.6.- {ECO:0000313|EMBL:CAZ97290.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zob
Sulfatase, family S1-17 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L7B6_ZOBGA
sw_4_scaffold_56_9
unknown

Not on your lists

13299..13784
DNA (486bp) protein (162aa)

This feature has no annotations

sw_4_scaffold_56_10

Not on your lists

comp(13613..15181)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6M1_ISOPI
Marine sediment metagenome DNA, contig: S06H3_L02471 {ECO:0000313|EMBL:GAI17249.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
sw_4_scaffold_56_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15274..16536)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJ95_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73473.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_56_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16804..18492)
DNA (1689bp) protein (563aa)
sodium:solute symporter n=1 Tax=Salisaeta longa RepID=UPI0003B64615
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ACY48383.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
sw_4_scaffold_56_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18552..18854)
DNA (303bp) protein (101aa)
RNA polymerase subunit sigma-32 n=1 Tax=Salisaeta longa RepID=UPI0003B32777
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48384.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_56_14
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18891..19451)
DNA (561bp) protein (187aa)
Endoribonuclease L-PSP n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZQ8_CYCMS
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEL25722.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobact
sw_4_scaffold_56_15
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19573..21330)
DNA (1758bp) protein (586aa)
Cytochrome c class I n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZR3_CYCMS
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AEL25727.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain
sw_4_scaffold_56_16
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21345..24767)
DNA (3423bp) protein (1141aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYH0_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49411.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
sw_4_scaffold_56_17
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25038..26357)
DNA (1320bp) protein (440aa)
Dihydroorotase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANF2_MARSH
dihydroorotase
Dihydroorotase {ECO:0000313|EMBL:EAR02524.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170
sw_4_scaffold_56_18
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26566..27747)
DNA (1182bp) protein (394aa)
Selenocysteine synthase (Seryl-tRNASer selenium transferase) n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANE8_MARSH
selenocysteine synthase
Selenocysteine synthase (Seryl-tRNASer selenium transferase) {ECO:0000313|EMBL:EAR02520.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribact
sw_4_scaffold_56_19
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27865..29097)
DNA (1233bp) protein (411aa)
Selenocysteine synthase (Seryl-tRNASer selenium transferase) n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANE8_MARSH
selenocysteine synthase
Selenocysteine synthase (Seryl-tRNASer selenium transferase) {ECO:0000313|EMBL:EAR02520.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribact
sw_4_scaffold_56_20
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29204..29710)
DNA (507bp) protein (169aa)
Endoribonuclease L-PSP n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZMD6_9BACT
Endoribonuclease L-PSP {ECO:0000313|EMBL:EON75242.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacter
endoribonuclease L-PSP
sw_4_scaffold_56_21
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(29855..30799)
DNA (945bp) protein (315aa)
gluconolactonase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B57E37
SMP-30/gluconolaconase/LRE domain-containing protein Tax=RBG_16_Ignavibacteria_34_14_curated
SMP-30/gluconolaconase/LRE-like region-containing protein
sw_4_scaffold_56_22
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30875..32500)
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037739B9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL25730.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobac
sw_4_scaffold_56_23
unknown

Not on your lists

comp(32516..32623)
DNA (108bp) protein (36aa)

This feature has no annotations

sw_4_scaffold_56_24
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32725..35790)
DNA (3066bp) protein (1022aa)
TonB-dependent receptor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V7F2_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EPR65856.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-
TonB-dependent receptor plug
sw_4_scaffold_56_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(36529..37698)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5L5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44432.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_56_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(38119..38535)
DNA (417bp) protein (139aa)
Rrf2 family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B636AC
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBH23845.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_4_scaffold_56_27
unknown

Not on your lists

39049..39279
DNA (231bp) protein (77aa)

This feature has no annotations

sw_4_scaffold_56_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(39399..39830)
DNA (432bp) protein (144aa)
CoA-binding domain-containing protein
CoA-binding domain-containing protein id=24658850 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
CoA binding domain protein {ECO:0000313|EMBL:ABC45403.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_4_scaffold_56_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


40146..42761
DNA (2616bp) protein (872aa)
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=24658851 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
leuS; leucyl-tRNA synthetase
sw_4_scaffold_56_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

42977..43735
DNA (759bp) protein (253aa)
GlcNAc-PI de-N-acetylase family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S414_SALRD
LmbE-like protein
GlcNAc-PI de-N-acetylase family {ECO:0000313|EMBL:ABC44079.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
Displaying items 1-30 of 46 in total

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