ggKbase home page

sw_5_scaffold_1164

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1164_1
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..392
DNA (390bp) protein (130aa)
manB1; phosphoglucomutase/phosphomannomutase (EC:5.4.2.2 5.4.2.8)
Phosphoglucosamine mutase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K3P7_9EURY
Phosphoglucosamine mutase {ECO:0000313|EMBL:EMA14754.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATC
sw_5_scaffold_1164_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

781..1653
DNA (873bp) protein (291aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MED1_9EURY
sw_5_scaffold_1164_3
unknown

Not on your lists

2260..3183
DNA (924bp) protein (308aa)

This feature has no annotations

sw_5_scaffold_1164_4
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3180..3530)
DNA (351bp) protein (117aa)
ISH4-type transposase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YUF9_9EURY
ISH4-type transposase {ECO:0000313|EMBL:GAD52367.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
sw_5_scaffold_1164_5
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3703..4302
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEZ90803.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
phosphoadenosine phosphosulfate reductase
sw_5_scaffold_1164_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4203..4571)
DNA (369bp) protein (123aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8A3_9EURY
nitrogen-fixing NifU domain protein
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:AGN01608.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
sw_5_scaffold_1164_7
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5579..5740)
DNA (162bp) protein (54aa)
Putative transposase (TCE33) n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PGN5_9EURY
Putative transposase (TCE33) {ECO:0000313|EMBL:EMA69252.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 149
transposase family protein
sw_5_scaffold_1164_8
unknown

Not on your lists

6645..6932
DNA (288bp) protein (96aa)

This feature has no annotations

sw_5_scaffold_1164_9
unknown

Not on your lists

7620..8063
DNA (444bp) protein (148aa)

This feature has no annotations

sw_5_scaffold_1164_10
unknown

Not on your lists

comp(8953..9450)
DNA (498bp) protein (166aa)

This feature has no annotations

sw_5_scaffold_1164_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9586..10275
DNA (690bp) protein (230aa)
Short chanin dehydrogenase/ reductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX05_9EURY
Short chanin dehydrogenase/ reductase {ECO:0000313|EMBL:EFW90808.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
fabG3; 3-oxoacyl-[acyl-carrier protein] reductase
sw_5_scaffold_1164_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10424..11896)
DNA (1473bp) protein (491aa)
Single-stranded-DNA-specific exonuclease RecJ1 {ECO:0000313|EMBL:CAI48192.1}; EC=3.1.-.- {ECO:0000313|EMBL:CAI48192.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Single-stranded-DNA-specific exonuclease RecJ1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUI8_NATPD
recJ; single-stranded-DNA-specific exonuclease
sw_5_scaffold_1164_13
unknown

Not on your lists

12152..12820
DNA (669bp) protein (223aa)

This feature has no annotations

sw_5_scaffold_1164_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12790..13551)
DNA (762bp) protein (254aa)
uroporphyrinogen III synthase n=1 Tax=Halomicrobium katesii RepID=UPI000366BF53
hemD; uroporphyrinogen-III synthase
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:ACV47230.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_5_scaffold_1164_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13541..14368)
DNA (828bp) protein (276aa)
uroporphyrin-III C-methyltransferase id=24613982 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ESP89606.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="
uroporphyrin-III C-methyltransferase
sw_5_scaffold_1164_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14365..15567)
DNA (1203bp) protein (401aa)
hemC; hydroxymethylbilane synthase (porphobilinogen deaminase) (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9U1_9EURY
Porphobilinogen deaminase {ECO:0000313|EMBL:EMA42496.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
sw_5_scaffold_1164_17
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15675..16079
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V4J5_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA25021.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_5_scaffold_1164_18
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16141..17520)
DNA (1380bp) protein (460aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000313|EMBL:EMA60167.1};; Gl
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NQG3_9EURY
glutamate-1-semialdehyde aminotransferase
sw_5_scaffold_1164_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17575..19020)
DNA (1446bp) protein (482aa)
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D122_9EURY
Amidase {ECO:0000313|EMBL:ELZ28392.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
sw_5_scaffold_1164_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19175..20233)
DNA (1059bp) protein (353aa)
Rh family protein/ammonium transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP9_9EURY
Rh family protein/ammonium transporter {ECO:0000313|EMBL:EMA43887.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
Rh family protein/ammonium transporter
Displaying 20 items

View Taxonomy