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sw_5_scaffold_123

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_123_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..638
DNA (636bp) protein (212aa)
NADH:flavin oxidoreductase, Old Yellow Enzyme family n=1 Tax=halophilic archaeon J07HX64 RepID=U1QUQ3_9EURY
NADH:flavin oxidoreductase, Old Yellow Enzyme family {ECO:0000313|EMBL:ERH11023.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.
oxidoreductase
sw_5_scaffold_123_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1281..1838)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18IF2_HALWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ52220.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_5_scaffold_123_3
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2358..2774)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9YIY5_NATP1
Uncharacterized protein {ECO:0000313|EMBL:ELY72903.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
hypothetical protein
sw_5_scaffold_123_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3937..4779)
DNA (843bp) protein (281aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MS17_9EURY
5-carboxymethyl-2-hydroxymuconate delta-isomerase {ECO:0000313|EMBL:EMA48163.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
sw_5_scaffold_123_5
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4829..5332)
DNA (504bp) protein (168aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5S8R3_9PLAN
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EMI22564.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.
lactoylglutathione lyase family protein
sw_5_scaffold_123_6
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5425..5850
DNA (426bp) protein (142aa)
UPF0047 family protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUQ4_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ75287.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lucentense (strain DSM
sw_5_scaffold_123_7
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5893..6672
DNA (780bp) protein (260aa)
Fructose-1,6-bisphosphate aldolase of the DhnA family protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HX21_9EURY
Fructose-1,6-bisphosphate aldolase of the DhnA family protein {ECO:0000313|EMBL:ELZ89026.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sou
fbaB; fructose-1,6-bisphosphate aldolase of the DhnA family
sw_5_scaffold_123_8
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6669..7364
DNA (696bp) protein (232aa)
tpiA2; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G253_9EURY
Triosephosphate isomerase {ECO:0000313|EMBL:CQR48676.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
sw_5_scaffold_123_9
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7521..8963
DNA (1443bp) protein (481aa)
Rhamnulokinase n=2 Tax=Haloarcula hispanica RepID=G0I053_HALHT
rhamnulokinase
Rhamnulokinase {ECO:0000313|EMBL:AHB68137.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_5_scaffold_123_10
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8964..9743)
DNA (780bp) protein (260aa)
Dehydrogenase (Fragment) n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1NQY7_9EURY
Dehydrogenase {ECO:0000313|EMBL:ERG99910.1}; Flags: Fragment;; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J0
short-chain dehydrogenase/reductase sdr
sw_5_scaffold_123_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9865..10647
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYQ2_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27542.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
short-chain dehydrogenase
sw_5_scaffold_123_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10693..11865)
DNA (1173bp) protein (391aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXI8_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ELZ27930.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Ha
mandelate racemase/muconate lactonizing protein
sw_5_scaffold_123_13
unknown

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11989..12171
DNA (183bp) protein (61aa)

This feature has no annotations

sw_5_scaffold_123_14
unknown

Not on your lists

comp(12136..12315)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_5_scaffold_123_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12403..12732
DNA (330bp) protein (110aa)
Rhamnulokinase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L3Q1_HALJP
Rhamnulokinase {ECO:0000313|EMBL:EMA27718.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
rhamnulokinase
sw_5_scaffold_123_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12714..13232
DNA (519bp) protein (173aa)
Rhamnulokinase n=1 Tax=Halogranum salarium B-1 RepID=J3JDJ5_9EURY
Rhamnulokinase {ECO:0000313|EMBL:EJN57544.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
rhamnulokinase
sw_5_scaffold_123_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13895..15547
DNA (1653bp) protein (551aa)
putative extracellular solute-binding protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625729
Uncharacterized protein {ECO:0000313|EMBL:ETX09130.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ABC transporter substrate-binding protein
sw_5_scaffold_123_18

Not on your lists

15598..16545
DNA (948bp) protein (316aa)
binding-protein-dependent transport systems inner membrane component n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625725
Marine sediment metagenome DNA, contig: S03H2_C00256 {ECO:0000313|EMBL:GAH29558.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transmembrane transporter
sw_5_scaffold_123_19
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16831..17316
DNA (486bp) protein (162aa)
binding-protein-dependent transport systems inner membrane component n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625726
Uncharacterized protein {ECO:0000313|EMBL:ESY90391.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
putative ABC-type sugar transport system, permease component
sw_5_scaffold_123_20
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17319..18263
DNA (945bp) protein (315aa)
ABC transporter n=2 Tax=Halorubrum RepID=M0D137_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ28558.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family
sw_5_scaffold_123_21
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18399..18695)
DNA (297bp) protein (99aa)
L-fuculose phosphate aldolase {ECO:0000313|EMBL:ADE02108.1}; EC=4.1.2.17 {ECO:0000313|EMBL:ADE02108.1};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halo
L-fuculose phosphate aldolase n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQU5_HALVD
fuca; L-fuculose phosphate aldolase
sw_5_scaffold_123_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19274..20035
DNA (762bp) protein (254aa)
IclR family transcriptional regulator n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HGW1_9EURY
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:ESP87069.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
sw_5_scaffold_123_23
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20497..20871)
DNA (375bp) protein (125aa)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D734_9EURY
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000313|EMBL:ELZ31311.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halog
4-hydroxythreonine-4-phosphate dehydrogenase
sw_5_scaffold_123_24
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21044..21682)
DNA (639bp) protein (213aa)
YgbK domain-containing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9B7_9EURY
YgbK domain-containing protein {ECO:0000313|EMBL:ELZ31312.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pal
ygbK domain-containing protein
sw_5_scaffold_123_25
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21905..22060)
DNA (156bp) protein (52aa)
YgbK domain protein {ECO:0000313|EMBL:ADJ14555.1}; YgbK domain-containing protein {ECO:0000313|EMBL:ELY39927.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
sw_5_scaffold_123_26
unknown

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comp(22330..22479)
DNA (150bp) protein (50aa)

This feature has no annotations

sw_5_scaffold_123_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22622..23857
DNA (1236bp) protein (412aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWI2_9EURY
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ELZ27545.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
hypothetical protein
sw_5_scaffold_123_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23866..24876
DNA (1011bp) protein (337aa)
Sugar ABC transporter integral membrane subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWF3_9EURY
Sugar ABC transporter integral membrane subunit {ECO:0000313|EMBL:ELZ27546.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
hypothetical protein
sw_5_scaffold_123_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24948..25682
DNA (735bp) protein (245aa)
ABC-transport system ATP binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D096_9EURY
ABC-transport system ATP binding protein {ECO:0000313|EMBL:ELZ27544.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
hypothetical protein
sw_5_scaffold_123_30
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26583..26864
DNA (282bp) protein (94aa)
Sorbitol dehydrogenase (L-iditol 2-dehydrogenase) n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B585_NATA1
Sorbitol dehydrogenase (L-iditol 2-dehydrogenase) {ECO:0000313|EMBL:ELZ05965.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba
sorbitol dehydrogenase (L-iditol 2-dehydrogenase)
Displaying items 1-30 of 115 in total

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