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sw_5_scaffold_126

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_126_1
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..234)
DNA (234bp) protein (78aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055191}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055
Uridylate kinase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9ZDW4_9EURY
uridylate kinase
sw_5_scaffold_126_2
unknown

Not on your lists

comp(281..1249)
DNA (969bp) protein (323aa)

This feature has no annotations

sw_5_scaffold_126_3
unknown

Not on your lists

comp(1310..1747)
DNA (438bp) protein (146aa)

This feature has no annotations

sw_5_scaffold_126_4
unknown

Not on your lists

2208..2705
DNA (498bp) protein (166aa)

This feature has no annotations

sw_5_scaffold_126_trna_12
unknown

Not on your lists

comp(2328..2412)
DNA (85bp)
transferRNA
sw_5_scaffold_126_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2752..2991)
DNA (240bp) protein (80aa)
DUF2892 family protein {ECO:0000313|EMBL:CAI50688.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
sw_5_scaffold_126_6
unknown

Not on your lists

3173..3610
DNA (438bp) protein (146aa)

This feature has no annotations

sw_5_scaffold_126_7
unknown

Not on your lists

comp(3689..4033)
DNA (345bp) protein (115aa)

This feature has no annotations

sw_5_scaffold_126_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4217..5992)
DNA (1776bp) protein (592aa)
Probable translation initiation factor IF-2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=IF2P_NATPD
tif5B; translation initiation factor IF-2
Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
sw_5_scaffold_126_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6140..7003
DNA (864bp) protein (288aa)
Rhomboid family protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IHV5_9EURY
Rhomboid family protein {ECO:0000313|EMBL:AHG03183.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
rhomboid family protein
sw_5_scaffold_126_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6984..7895)
DNA (912bp) protein (304aa)
Leader peptidase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSX3_HALBP
leader peptidase
Leader peptidase {ECO:0000313|EMBL:ELY26863.1}; Leader peptidase family protein {ECO:0000313|EMBL:ADQ65861.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
sw_5_scaffold_126_11
unknown

Not on your lists

comp(7888..8424)
DNA (537bp) protein (179aa)

This feature has no annotations

sw_5_scaffold_126_12

Not on your lists

comp(8433..8750)
DNA (318bp) protein (106aa)
translation initiation factor Sui1; K03113 translation initiation factor 1 id=24622001 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;
translation initiation factor Sui1
sw_5_scaffold_126_13
unknown

Not on your lists

comp(8832..9185)
DNA (354bp) protein (118aa)

This feature has no annotations

sw_5_scaffold_126_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9228..10043)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLH5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ22734.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_5_scaffold_126_15
unknown

Not on your lists

10196..10420
DNA (225bp) protein (75aa)

This feature has no annotations

sw_5_scaffold_126_16
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(10425..11414)
DNA (990bp) protein (330aa)
Protease HtpX homolog {ECO:0000255|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_00188};; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmata
protease n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B47C97
heat shock protein HtpX
sw_5_scaffold_126_17
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11505..12164
DNA (660bp) protein (220aa)
heat shock protein HtpX (EC:3.4.24.-)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188, ECO:0000313|EMBL:CCA92898.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteri
Protease HtpX homolog n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IN96_9SPHN
sw_5_scaffold_126_18
unknown

Not on your lists

comp(12168..12437)
DNA (270bp) protein (90aa)

This feature has no annotations

sw_5_scaffold_126_19
unknown

Not on your lists

12517..12738
DNA (222bp) protein (74aa)

This feature has no annotations

sw_5_scaffold_126_20
unknown

Not on your lists

12821..13423
DNA (603bp) protein (201aa)

This feature has no annotations

sw_5_scaffold_126_21

Not on your lists


comp(13424..13822)
DNA (399bp) protein (133aa)
translation initiation factor IF-5A; K03263 translation initiation factor 5A id=24622481 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
tif5A; translation initiation factor IF-5A
sw_5_scaffold_126_22
unknown

Not on your lists

comp(13877..14125)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_5_scaffold_126_23
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14335..14991
DNA (657bp) protein (219aa)
Rhomboid family protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18HT5_HALWD
glpG; rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:CAJ52450.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_5_scaffold_126_24
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14996..15496)
DNA (501bp) protein (167aa)
Transcription elongation factor Spt5 n=1 Tax=halophilic archaeon J07HX5 RepID=U1N040_9EURY
nusG; transcription antitermination protein NusG
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_5_scaffold_126_25
unknown

Not on your lists

15546..15758
DNA (213bp) protein (71aa)

This feature has no annotations

sw_5_scaffold_126_26
unknown

Not on your lists

15943..16479
DNA (537bp) protein (179aa)

This feature has no annotations

sw_5_scaffold_126_trna_11
unknown

Not on your lists

comp(16554..16628)
DNA (75bp)
transferRNA
sw_5_scaffold_126_trna_10
unknown

Not on your lists

comp(16748..16822)
DNA (75bp)
transferRNA
sw_5_scaffold_126_27
unknown

Not on your lists

comp(16843..17103)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

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