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sw_5_scaffold_1023

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1023_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(511..1278)
DNA (768bp) protein (256aa)
ArcR family transcription regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVV0_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELZ27350.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
arcR21; ArcR family transcription regulator
sw_5_scaffold_1023_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1401..2507)
DNA (1107bp) protein (369aa)
NADH-dependent dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZM5_9EURY
NADH-dependent dehydrogenase {ECO:0000313|EMBL:ELZ27349.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum palli
NADH-dependent dehydrogenase
sw_5_scaffold_1023_3
unknown

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2599..2832
DNA (234bp) protein (78aa)

This feature has no annotations

sw_5_scaffold_1023_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2905..3096
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2Z0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52241.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_5_scaffold_1023_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3310..4755
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L4B0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28386.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_5_scaffold_1023_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5081..6229
DNA (1149bp) protein (383aa)
Oxidoreductase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L480_HALJP
Oxidoreductase {ECO:0000313|EMBL:EMA28387.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
oxidoreductase
sw_5_scaffold_1023_7
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6272..7615)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9F1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE58814.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_5_scaffold_1023_8
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7719..8561
DNA (843bp) protein (281aa)
5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDA9_9EURY
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:KDE58813.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagn
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
sw_5_scaffold_1023_9
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8713..9219)
DNA (507bp) protein (169aa)
Isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W1F5_9EURY
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ELY43295.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natro
sw_5_scaffold_1023_10
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9778..10443
DNA (666bp) protein (222aa)
IclR family transcriptional regulator n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VP80_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELY38995.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ti
IclR family transcriptional regulator
sw_5_scaffold_1023_11

Not on your lists

10383..10607
DNA (225bp) protein (75aa)
Transcriptional regulator, IclR family n=1 Tax=halophilic archaeon DL31 RepID=G2MNZ3_9ARCH
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEN07584.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_1023_12
unknown

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10881..10991
DNA (111bp) protein (37aa)

This feature has no annotations

sw_5_scaffold_1023_13
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11196..11498
DNA (303bp) protein (101aa)
IclR family transcriptional regulator n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A522_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELY93436.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeire
IclR family transcriptional regulator
sw_5_scaffold_1023_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12241..12435)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYB2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26879.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_5_scaffold_1023_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12624..12803
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NEH1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56251.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_1023_16
unknown

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comp(12879..13547)
DNA (669bp) protein (223aa)

This feature has no annotations

sw_5_scaffold_1023_17
unknown

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14151..14246
DNA (96bp) protein (32aa)

This feature has no annotations

sw_5_scaffold_1023_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14474..15904)
DNA (1431bp) protein (477aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYR7_9EURY
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:ELZ27009.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
Chromosome segregation protein (Spc25, Csm1, Pcs1)
Displaying 18 items

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