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sw_5_scaffold_1395

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1395_1
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..471
DNA (471bp) protein (157aa)
Polysaccharide biosynthesis protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BU23_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ELZ13898.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JC
membrane protein involved in the export of O-antigen and teichoic acid
sw_5_scaffold_1395_2
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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530..1870
DNA (1341bp) protein (447aa)
Sulfatase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8C5_HALXS
sulfatase
Sulfatase {ECO:0000313|EMBL:AEH36965.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 140
sw_5_scaffold_1395_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1877..3082)
DNA (1206bp) protein (402aa)
LPS glycosyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMG3_HALVA
LPS glycosyltransferase {ECO:0000313|EMBL:EMA10201.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
group 1 glycosyl transferase
sw_5_scaffold_1395_4
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3086..4015)
DNA (930bp) protein (310aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AKH97417.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AKH97417.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halana
Nucleoside-diphosphate-sugar epimerase ( dTDP-glucose 4,6-dehydratase) n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PQE7_9EURY
gmd; GDP-D-mannose dehydratase
sw_5_scaffold_1395_5
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4111..5385)
DNA (1275bp) protein (425aa)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:AKH97418.1}; EC=1.1.1.22 {ECO:0000313|EMBL:AKH97418.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PNI6_9EURY
sw_5_scaffold_1395_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5465..6379)
DNA (915bp) protein (305aa)
Glycosyl transferase family 2 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DA41_HALXS
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEH36963.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
sw_5_scaffold_1395_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6948..7172
DNA (225bp) protein (75aa)
aglF; sugar nucleotidyltransferase AglF (EC:2.7.7.-)
UTP--glucose-1-phosphate uridylyltransferase AglF {ECO:0000313|EMBL:CCQ37675.1}; EC=2.7.7.9 {ECO:0000313|EMBL:CCQ37675.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
Sugar nucleotidyltransferase AglF n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLG5_NATM8
sw_5_scaffold_1395_8
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7221..7646)
DNA (426bp) protein (142aa)
PIN domain protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XRG8_9EURY
PIN domain protein {ECO:0000313|EMBL:ELY64375.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795.;"
putative nucleic acid-binding protein, contains PIN domain
sw_5_scaffold_1395_9
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7643..7933)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XRE2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG00670.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_5_scaffold_1395_10
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8122..9111
DNA (990bp) protein (330aa)
galE1; UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z3D0_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY79683.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM
sw_5_scaffold_1395_11
unknown

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9197..9352
DNA (156bp) protein (52aa)

This feature has no annotations

sw_5_scaffold_1395_12
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9410..11242)
DNA (1833bp) protein (611aa)
glmS2; glucosamine-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UXR8_HALMA
sw_5_scaffold_1395_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11242..12432)
DNA (1191bp) protein (397aa)
graD_5; sugar nucleotidyltransferase ( glucose-1-phosphate thymidylyltransferase ) 4 (EC:2.7.7.24)
Sugar nucleotidyltransferase {ECO:0000313|EMBL:CAI49284.1}; EC=2.7.7.- {ECO:0000313|EMBL:CAI49284.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
sugar nucleotidyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI000361D31A
sw_5_scaffold_1395_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12669..12866
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPP9_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36047.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_1395_15
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12817..13083)
DNA (267bp) protein (89aa)
speE; spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R191_HALMT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=52
Displaying 15 items

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