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sw_5_scaffold_1618

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1618_1

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comp(1..630)
DNA (630bp) protein (210aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y969_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11483.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
branched-chain amino acid ABC transporter permease
sw_5_scaffold_1618_2

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comp(627..1763)
DNA (1137bp) protein (379aa)
Branched-chain amino acid ABC-type transport system, permease component n=2 Tax=Archaea RepID=U1NLM0_9EURY
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ESS11482.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
livH-4; branched-chain amino acid ABC transporter permease
sw_5_scaffold_1618_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1953..3152
DNA (1200bp) protein (400aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Phosphoglycerate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PGK_NATPD
sw_5_scaffold_1618_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3149..3676
DNA (528bp) protein (176aa)
GNAT family acetyltransferase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJX8_9EURY
GNAT family acetyltransferase {ECO:0000313|EMBL:ESP88224.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
N-acetyltransferase GCN5
sw_5_scaffold_1618_trna_1
unknown

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3710..3783
DNA (74bp)
transferRNA
sw_5_scaffold_1618_5
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3980..4759)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000363FD1E
Uncharacterized protein {ECO:0000313|EMBL:EMA12310.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_5_scaffold_1618_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4756..5001)
DNA (246bp) protein (82aa)
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] id=24629169 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Peptidase M20 family protein {ECO:0000313|EMBL:ERG91919.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
sw_5_scaffold_1618_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5009..5497)
DNA (489bp) protein (163aa)
hdrA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCX1_9EURY
Dihydrofolate reductase {ECO:0000313|EMBL:ELZ21121.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_5_scaffold_1618_8
unknown

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comp(5494..5955)
DNA (462bp) protein (154aa)
FMN / Fe-S cluster binding protein
sw_5_scaffold_1618_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6316..6876)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0STT8_9EURY
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
sw_5_scaffold_1618_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7111..7890
DNA (780bp) protein (260aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
elaC; ribonuclease Z (RNase Z) (tRNA 3 endonuclease) (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NJI7_9EURY
sw_5_scaffold_1618_11
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8023..9219)
DNA (1197bp) protein (399aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643};; 5'-phosphoribosylglycin
purT; phosphoribosylglycinamide formyltransferase 2 (EC:2.1.2.-)
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E8B1_9EURY
sw_5_scaffold_1618_12
unknown

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9243..9431
DNA (189bp) protein (63aa)

This feature has no annotations

sw_5_scaffold_1618_13
unknown

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9591..9800
DNA (210bp) protein (70aa)

This feature has no annotations

sw_5_scaffold_1618_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9797..10027)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJC2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22457.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_1618_15
unknown

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10134..10490
DNA (357bp) protein (119aa)

This feature has no annotations

sw_5_scaffold_1618_16
unknown

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10551..10781
DNA (231bp) protein (77aa)

This feature has no annotations

sw_5_scaffold_1618_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10778..11923)
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase 6 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM12_9EURY
Acyl-CoA dehydrogenase 6 {ECO:0000313|EMBL:EMA45774.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
acyl-CoA dehydrogenase
sw_5_scaffold_1618_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11963..12415)
DNA (453bp) protein (151aa)
CBS domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRQ3_HALMO
CBS domain-containing protein {ECO:0000313|EMBL:EMA48311.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DS
CBS domain-containing protein
Displaying 19 items

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