ggKbase home page

sw_5_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_17_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..672
DNA (672bp) protein (224aa)
Chromosome partition protein {ECO:0000313|EMBL:EMA30622.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DS
sw_5_scaffold_17_2
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

779..1633
DNA (855bp) protein (285aa)
Partition protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DW96_9EURY
Partition protein {ECO:0000313|EMBL:CDK40632.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
Cobyrinic acid ac-diamide synthase
sw_5_scaffold_17_3
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1626..2144
DNA (519bp) protein (173aa)
HNH-type endonuclease n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DQ04_9EURY
HNH-type endonuclease {ECO:0000313|EMBL:ELZ37571.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
hypothetical protein
sw_5_scaffold_17_4
unknown

Not on your lists

2245..3132
DNA (888bp) protein (296aa)

This feature has no annotations

sw_5_scaffold_17_5
unknown

Not on your lists

3135..3614
DNA (480bp) protein (160aa)

This feature has no annotations

sw_5_scaffold_17_6
unknown

Not on your lists

3611..3913
DNA (303bp) protein (101aa)

This feature has no annotations

sw_5_scaffold_17_7
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4002..4274)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IL61_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ96209.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
sw_5_scaffold_17_8
unknown

Not on your lists

4333..5130
DNA (798bp) protein (266aa)

This feature has no annotations

sw_5_scaffold_17_9
unknown

Not on your lists

5075..5407
DNA (333bp) protein (111aa)

This feature has no annotations

sw_5_scaffold_17_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5404..6246
DNA (843bp) protein (281aa)
RAMP superfamily protein n=1 Tax=Clostridium difficile DA00212 RepID=T3UW27_CLODI
RAMP superfamily protein; TaxID=1151347 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00212.;"
sw_5_scaffold_17_11
unknown

Not on your lists

6246..7019
DNA (774bp) protein (258aa)

This feature has no annotations

sw_5_scaffold_17_12
unknown

Not on your lists

7016..7744
DNA (729bp) protein (243aa)

This feature has no annotations

sw_5_scaffold_17_13
unknown

Not on your lists

7793..8644
DNA (852bp) protein (284aa)

This feature has no annotations

sw_5_scaffold_17_14
unknown

Not on your lists

8641..8898
DNA (258bp) protein (86aa)

This feature has no annotations

sw_5_scaffold_17_15
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8901..10229
DNA (1329bp) protein (443aa)
Immunoglobulin-binding regulator A family protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WY71_ANEAE
Immunoglobulin-binding regulator A family protein {ECO:0000313|EMBL:ERI07203.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibaci
phosphoadenosine phosphosulfate reductase
sw_5_scaffold_17_16
unknown

Not on your lists

10222..10653
DNA (432bp) protein (144aa)

This feature has no annotations

sw_5_scaffold_17_17
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10646..11362
DNA (717bp) protein (239aa)
Putative immunoglobulin-binding regulator B n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WF72_ANEAE
Putative immunoglobulin-binding regulator B {ECO:0000313|EMBL:ERI07204.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;
ibrB; immunoglobulin-binding regulator
sw_5_scaffold_17_18
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11591..12193
DNA (603bp) protein (201aa)
Integrase family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FAA2_9EURY
Integrase family protein {ECO:0000313|EMBL:ELZ56273.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 70
integrase family protein
sw_5_scaffold_17_19
unknown

Not on your lists

12294..12821
DNA (528bp) protein (176aa)

This feature has no annotations

sw_5_scaffold_17_20
unknown

Not on your lists

12823..13155
DNA (333bp) protein (111aa)

This feature has no annotations

sw_5_scaffold_17_21
unknown

Not on your lists

13156..13806
DNA (651bp) protein (217aa)

This feature has no annotations

sw_5_scaffold_17_22
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13837..14187)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4H0E6_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE05263.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_5_scaffold_17_23
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14279..14707)
DNA (429bp) protein (143aa)
Nucleotide-binding protein, PIN domain-containing protein n=3 Tax=Haloferax RepID=L5NJ55_9EURY
DNA-binding protein
Nucleotide-binding protein, PIN domain-containing protein {ECO:0000313|EMBL:ELZ93374.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source
sw_5_scaffold_17_24
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14704..14949)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NAM5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG93860.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_5_scaffold_17_25
unknown

Not on your lists

comp(15023..15139)
DNA (117bp) protein (39aa)

This feature has no annotations

sw_5_scaffold_17_26
unknown

Not on your lists

comp(15157..15468)
DNA (312bp) protein (104aa)

This feature has no annotations

sw_5_scaffold_17_27
unknown

Not on your lists

comp(15465..15797)
DNA (333bp) protein (111aa)

This feature has no annotations

sw_5_scaffold_17_28
Bibersteinia trehalosi, Bibersteinia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15879..18035)
DNA (2157bp) protein (719aa)
Autotransporter adhesin n=1 Tax=Bibersteinia trehalosi USDA-ARS-USMARC-192 RepID=M4RHW8_PASTR
Autotransporter adhesin
Autotransporter adhesin {ECO:0000313|EMBL:AGH38012.1}; TaxID=1171377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Bibersteinia.;" source="Bibersteinia treha
sw_5_scaffold_17_29
Natrialba phage PhiCh1, Caudovirales, Viruses

Not on your lists

comp(18046..18657)
DNA (612bp) protein (204aa)
Uncharacterized protein (Fragment) n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TT71_9EURY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAM88705.1}; TaxID=114777 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Natrialba phage PhiCh1.;"
sw_5_scaffold_17_30
Natrialba phage PhiCh1, Caudovirales, Viruses

Not on your lists

comp(18661..19923)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SIA1_9EURY
baseplate J family protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAM88704.1}; TaxID=114777 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Natrialba phage PhiCh1.;"
Displaying items 1-30 of 99 in total

View Taxonomy