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sw_5_scaffold_236

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_236_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..210)
-----------------
DNA (210bp)
protein (70aa)
galE; nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=2 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EM2_HALWD
GalE family epimerase/dehydratase {ECO:0000313|EMBL:CAJ53601.2}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsb
sw_5_scaffold_236_2
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(261..1601)
-----------------
DNA (1341bp)
protein (447aa)
Sulfatase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EJ96_9EURY
Arylsulfatase {ECO:0000313|EMBL:CQR48727.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
sulfatase
sw_5_scaffold_236_3
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(1724..2848)
-----------------
DNA (1125bp)
protein (375aa)
Glycosyl transferase group 1 n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6Z1_METSW
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEG18358.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanob
sw_5_scaffold_236_4
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2981..4264
-----------------
DNA (1284bp)
protein (428aa)
type I phosphodiesterase/nucleotide pyrophosphatase Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
Type I phosphodiesterase/nucleotide pyrophosphatase id=3861352 bin=GWF2_Ignavibacteria_35_20 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
sw_5_scaffold_236_5
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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4321..5424
-----------------
DNA (1104bp)
protein (368aa)
Glycosyl transferase, group 1 n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CTC4_METMJ
glycosyl transferase, group 1
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABN56624.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanocu
sw_5_scaffold_236_6
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5519..6865)
-----------------
DNA (1347bp)
protein (449aa)
Putative sulfatase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JQC9_9EURY
Putative sulfatase {ECO:0000313|EMBL:EMA10573.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799
putative sulfatase
sw_5_scaffold_236_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6892..7128)
-----------------
DNA (237bp)
protein (79aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44798.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_236_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7342..8868)
-----------------
DNA (1527bp)
protein (509aa)
Polysaccharide biosynthesis protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MAE8_HALMO
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EMA41370.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrh
polysaccharide biosynthesis protein
sw_5_scaffold_236_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8878..10188)
-----------------
DNA (1311bp)
protein (437aa)
arylsulfatase (EC:3.1.6.1)
Sulfatase {ECO:0000313|EMBL:CAJ53633.1}; EC=3.1.6.- {ECO:0000313|EMBL:CAJ53633.1};; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="
Sulfatase n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EJ1_HALWD
sw_5_scaffold_236_10
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10429..12123)
-----------------
DNA (1695bp)
protein (565aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF28120.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_5_scaffold_236_11
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12335..13282)
-----------------
DNA (948bp)
protein (316aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0ACL6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY95612.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
sw_5_scaffold_236_12
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13680..13913)
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DM52_DESRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG59394.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (stra
sw_5_scaffold_236_13
unknown

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comp(14087..14332)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

sw_5_scaffold_236_14
unknown

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comp(14437..14580)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

sw_5_scaffold_236_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14716..14982
-----------------
DNA (267bp)
protein (89aa)
Transposase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F498_9EURY
Transposase {ECO:0000313|EMBL:ELZ53474.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
transposase
sw_5_scaffold_236_16
unknown

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14991..15506
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

sw_5_scaffold_236_17
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15567..16361
-----------------
DNA (795bp)
protein (265aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JU25_NATP1
dTDP-glucose 4,6-dehydratase
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AGB33886.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain
sw_5_scaffold_236_18
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16364..16486
-----------------
DNA (123bp)
protein (41aa)
ADP-ribose pyrophosphatase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JQV4_NATP1
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:AGB33885.1}; NUDIX hydrolase {ECO:0000313|EMBL:ELY69375.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrin
Displaying 18 items

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