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sw_5_scaffold_2409

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2409_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..816)
DNA (816bp) protein (272aa)
proteasome-activating nucleotidase (EC:3.6.4.3)
Proteasome-activating nucleotidase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E6Y7_9EURY
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
sw_5_scaffold_2409_2
unknown

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1169..1459
DNA (291bp) protein (97aa)

This feature has no annotations

sw_5_scaffold_2409_3
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1545..2837
DNA (1293bp) protein (431aa)
Metallophosphoesterase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XJJ9_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:ELY61586.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongol
metallophosphoesterase
sw_5_scaffold_2409_4
Sporothrix schenckii, Sporothrix, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

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comp(3241..4026)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) RepID=U7PS25_SPOS1
Uncharacterized protein {ECO:0000313|EMBL:ERS98377.1}; TaxID=1391915 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomatace
cell wall surface anchor family protein
sw_5_scaffold_2409_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4098..5384
DNA (1287bp) protein (429aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP44_9EURY
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
DNA double-strand break repair Rad50 ATPase
sw_5_scaffold_2409_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5673..6119)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K987_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA17373.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_5_scaffold_2409_7
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6255..6713)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CSD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25322.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_5_scaffold_2409_8

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comp(6853..7164)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MQ45_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AEN07814.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
hypothetical protein
sw_5_scaffold_2409_9
unknown

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comp(8674..9537)
DNA (864bp) protein (288aa)

This feature has no annotations

sw_5_scaffold_2409_10
unknown

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10155..10490
DNA (336bp) protein (112aa)

This feature has no annotations

sw_5_scaffold_2409_11
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10685..10960)
DNA (276bp) protein (92aa)
transcriptional regulator, MarR family id=24615599 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ELZ46321.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
transcription regulator
sw_5_scaffold_2409_12
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11051..11614)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D8I1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02350.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_5_scaffold_2409_13
unknown

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12107..12382
DNA (276bp) protein (92aa)

This feature has no annotations

sw_5_scaffold_2409_14
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13564..13764)
DNA (201bp) protein (67aa)
Uncharacterized protein n=8 Tax=Haloarcula RepID=G0HXE1_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM57944.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_5_scaffold_2409_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13866..16655
DNA (2790bp) protein (930aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
polB1; DNA-directed DNA polymerase type II (EC:2.7.7.7)
DNA polymerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN01_9EURY
sw_5_scaffold_2409_16
unknown

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comp(16505..16969)
DNA (465bp) protein (155aa)

This feature has no annotations

sw_5_scaffold_2409_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17000..17296
DNA (297bp) protein (99aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8J6_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA54191.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
sufC; FeS assembly ATPase SufC
Displaying 17 items

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