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sw_5_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_21_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..297)
DNA (297bp) protein (99aa)
Carbohydrate kinase, FGGY family protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D1H5_9CLOT
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EEG54830.1}; Flags: Fragment;; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium
Carbohydrate kinase, FGGY
sw_5_scaffold_21_2

Not on your lists

398..1093
DNA (696bp) protein (232aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=uncultured bacterium RepID=C6KUF3_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:BAH89601.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
short-chain dehydrogenase/reductase
sw_5_scaffold_21_3
uncultured haloarchaeon, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1547..2356
DNA (810bp) protein (270aa)
ABC-type phosphate transport system, ATP-binding protein n=1 Tax=uncultured haloarchaeon RepID=A5YT61_9EURY
ABC-type phosphate transport system, ATP-binding protein {ECO:0000313|EMBL:ABQ76168.1}; TaxID=160804 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental sam
transposase family protein
sw_5_scaffold_21_4
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2436..3338)
DNA (903bp) protein (301aa)
Haloacetate dehalogenase DehH n=1 Tax=Octadecabacter arcticus 238 RepID=M9RPT0_9RHOB
Alpha/beta hydrolase family
Alpha/beta hydrolase family {ECO:0000313|EMBL:AHY47753.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rub
sw_5_scaffold_21_5
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3503..3784)
DNA (282bp) protein (94aa)
Phosphocarrier protein HPr n=5 Tax=Haloferax RepID=D4GUP8_HALVD
ptsH3; phosphocarrier protein HPr
Phosphocarrier protein HPr {ECO:0000313|EMBL:ADE04358.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATC
sw_5_scaffold_21_6
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3872..5596
DNA (1725bp) protein (575aa)
ptsI; phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Haloferax sp. BAB2207 RepID=L5NVY1_9EURY
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:ELK54555.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
sw_5_scaffold_21_7
unknown

Not on your lists

comp(5788..6384)
DNA (597bp) protein (199aa)

This feature has no annotations

sw_5_scaffold_21_8
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6457..7983)
DNA (1527bp) protein (509aa)
Phosphotransferase system component IIC n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUQ0_HALVD
PTS system, galactitol-specific enzyme II, C component
Galactitol permease IIC component {ECO:0000313|EMBL:CQR48678.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;
sw_5_scaffold_21_9
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8115..8402)
DNA (288bp) protein (96aa)
Presumptive arabitol PTS enzyme IIB n=6 Tax=Haloferax RepID=L5NZQ3_9EURY
Presumptive arabitol PTS enzyme IIB {ECO:0000313|EMBL:ELZ67691.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC B
presumptive arabitol PTS enzyme IIB
sw_5_scaffold_21_10
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8495..8938
DNA (444bp) protein (148aa)
PTS system, galactitol-specific enzyme II, A component (EC:2.7.1.69)
PTS system, galactitol-specific enzyme II, A component n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HA28_9EURY
PTS system galactitol-specific transporter subunit IIA {ECO:0000313|EMBL:CQR48679.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
sw_5_scaffold_21_11
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9381..10391
DNA (1011bp) protein (337aa)
Dehydrogenase E1 component n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BS21_9EURY
Dehydrogenase E1 component {ECO:0000313|EMBL:ELZ13218.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13
dehydrogenase E1 component
sw_5_scaffold_21_12
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10388..11380
DNA (993bp) protein (331aa)
Transketolase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CKV6_9EURY
Transketolase {ECO:0000313|EMBL:ELZ23920.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
transketolase
sw_5_scaffold_21_13
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11539..12930
DNA (1392bp) protein (464aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Citreicella sp. SE45 RepID=D0D8D1_9RHOB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIL36040.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846
extracellular solute-binding protein family 1
sw_5_scaffold_21_14
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

Not on your lists

12951..13868
DNA (918bp) protein (306aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=uncultured Chloroflexi bacterium RepID=H5SID2_9CHLR
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:BAL53478.1}; TaxID=166587 species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi
binding-protein-dependent transport systems inner membrane component
sw_5_scaffold_21_15
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

13858..14697
DNA (840bp) protein (280aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIF6_KOSOT
binding-protein-dependent transport systems inner membrane component
Tax=BJP_IG2158_Anaerolineales_38_74
sw_5_scaffold_21_16
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14806..15921
DNA (1116bp) protein (372aa)
Multiple sugar ABC transporter ATP-binding protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAL9_9EURY
sugar ABC transporter ATP-binding protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHB68139.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
sw_5_scaffold_21_17
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16070..17479)
DNA (1410bp) protein (470aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
Dihydrolipoyl dehydrogenase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P383_9EURY
dihydrolipoamide dehydrogenase
sw_5_scaffold_21_18
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17951..19411
DNA (1461bp) protein (487aa)
Xylulose kinase (EC:2.7.1.17)
Xylulose kinase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H644_9EURY
Xylulose kinase {ECO:0000313|EMBL:ELZ79986.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;"
sw_5_scaffold_21_19
unknown

Not on your lists

comp(20857..21069)
DNA (213bp) protein (71aa)

This feature has no annotations

sw_5_scaffold_21_20
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21085..21492)
DNA (408bp) protein (136aa)
Rhamnulokinase {ECO:0000313|EMBL:KJL19220.1}; EC=2.7.1.5 {ECO:0000313|EMBL:KJL19220.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Mic
carbohydrate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003494CA7
hypothetical protein
sw_5_scaffold_21_21
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21756..22475)
DNA (720bp) protein (240aa)
Triosephosphate isomerase {ECO:0000313|EMBL:ELZ79982.1}; EC=5.3.1.1 {ECO:0000313|EMBL:ELZ79982.1};; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofera
tpiA2; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H8C8_9EURY
sw_5_scaffold_21_22
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22472..23170)
DNA (699bp) protein (233aa)
Fructose-1,6-bisphosphate aldolase of the DhnA family protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G4B8_9EURY
Fructose-1,6-bisphosphate aldolase of the DhnA family protein {ECO:0000313|EMBL:ELZ65649.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" so
fbaB; fructose-1,6-bisphosphate aldolase of the DhnA family
sw_5_scaffold_21_23
unknown

Not on your lists

23187..23411
DNA (225bp) protein (75aa)

This feature has no annotations

sw_5_scaffold_21_24
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24308..24754
DNA (447bp) protein (149aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4B6_HALMD
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACV47938.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Hal
sw_5_scaffold_21_25
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25038..25583
DNA (546bp) protein (182aa)
Uncharacterized protein (Fragment) n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1N8T1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG99474.1}; Flags: Fragment;; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadra
tsgB1; sugar ABC transporter permease
sw_5_scaffold_21_26
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25580..25750
DNA (171bp) protein (57aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBL7_9EURY
Molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:AHG04160.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobact
molybdenum cofactor synthesis protein
sw_5_scaffold_21_27
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25840..26226)
DNA (387bp) protein (129aa)
Cupin domain-containing protein n=1 Tax=Halogranum salarium B-1 RepID=J3EXC5_9EURY
Cupin domain-containing protein {ECO:0000313|EMBL:EJN59712.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
cupin domain-containing protein
sw_5_scaffold_21_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26299..27132
DNA (834bp) protein (278aa)
fabG5; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
Short-chain family oxidoreductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVI8_9EURY
Short-chain family oxidoreductase {ECO:0000313|EMBL:EFW91251.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pau
sw_5_scaffold_21_29
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27134..28258)
DNA (1125bp) protein (375aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JSN3_HALVA
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA10964.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
ugpC1; sugar ABC transporter ATP-binding protein
sw_5_scaffold_21_30
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(28364..29200)
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIF6_KOSOT
transport protein
Tax=BJP_IG2158_Anaerolineales_38_74
Displaying items 1-30 of 48 in total

View Taxonomy