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sw_5_scaffold_256

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_256_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..179)
DNA (177bp) protein (59aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S069_SALRD
short chain dehydrogenase
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:ABC44488.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_5_scaffold_256_2
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(241..1185)
DNA (945bp) protein (315aa)
Gluconolactonase (EC:3.1.1.17)
Gluconolactonase {ECO:0000313|EMBL:AFZ35056.1}; EC=3.1.1.17 {ECO:0000313|EMBL:AFZ35056.1};; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (
Gluconolactonase n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XSM0_STAC7
sw_5_scaffold_256_3
unknown

Not on your lists

1522..3060
DNA (1539bp) protein (513aa)

This feature has no annotations

sw_5_scaffold_256_4
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3153..4616
DNA (1464bp) protein (488aa)
Cellobiose 2-epimerase n=2 Tax=Clostridium cellulovorans RepID=D9SUC9_CLOC7
N-acyl-D-glucosamine 2-epimerase Tax=CG_Ignavi_02
N-acylglucosamine 2-epimerase
sw_5_scaffold_256_5
unknown

Not on your lists

4613..5179
DNA (567bp) protein (189aa)

This feature has no annotations

sw_5_scaffold_256_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5517..7283)
DNA (1767bp) protein (589aa)
Sulfatase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ53_9BACT
Sulfatase {ECO:0000313|EMBL:EDY20744.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
arylsulfatase A family protein
sw_5_scaffold_256_7
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7532..9031)
DNA (1500bp) protein (500aa)
arylsulfatase (EC:3.1.6.1)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037E3611
Arylsulfatase A {ECO:0000313|EMBL:ELP34873.1}; TaxID=993516 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SWK
sw_5_scaffold_256_8
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9403..11316)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2PTZ1_9FLAO
carbohydrate-binding protein SusD
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:AKD02276.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
sw_5_scaffold_256_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11565..15326)
DNA (3762bp) protein (1254aa)
TonB-dependent receptor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRK3_DYAFD
TonB-dependent receptor {ECO:0000313|EMBL:ACT92706.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
TonB-dependent receptor
sw_5_scaffold_256_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15380..16543)
DNA (1164bp) protein (388aa)
Anti-FecI sigma factor, FecR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHL0_RHOM4
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACY47968.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
sw_5_scaffold_256_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16722..17297)
DNA (576bp) protein (192aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG02_RHOM4
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHG89921.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_5_scaffold_256_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17437..17853)
DNA (417bp) protein (139aa)
hypothetical protein
hypothetical protein id=24658226 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative CBS domain protein {ECO:0000313|EMBL:CBH25430.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_5_scaffold_256_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(18440..20098)
DNA (1659bp) protein (553aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPP3_9BACT
BNR repeat-containing glycosyl hydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
BNR repeat-containing glycosyl hydrolase
sw_5_scaffold_256_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(20152..20517)
DNA (366bp) protein (122aa)
Putative transposase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYS9_9CHLR
Putative transposase {ECO:0000313|EMBL:EFH85154.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemife
transposase
sw_5_scaffold_256_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(20669..21109)
DNA (441bp) protein (147aa)
Transposase ISLbp6 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH38_9CHLR
Transposase ISLbp6 {ECO:0000313|EMBL:EFH90780.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer
transposase
Displaying 15 items

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