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sw_5_scaffold_1817

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1817_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..366)
DNA (366bp) protein (122aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobac
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC48_9EURY
hypothetical protein
sw_5_scaffold_1817_2
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(557..2347)
DNA (1791bp) protein (597aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IBL4_HALRX
ABC-type multidrug transport system, ATPase and permease component
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGB15636.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;"
sw_5_scaffold_1817_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2463..3758)
DNA (1296bp) protein (432aa)
aglM; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase AglM {ECO:0000313|EMBL:CCQ37144.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CCQ37144.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
UDP-glucose 6-dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL61_NATM8
sw_5_scaffold_1817_4

Not on your lists

comp(3858..4166)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4XNM3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS10064.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
conserved hypothetical protein (DUF86)
sw_5_scaffold_1817_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4294..4725)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DE45_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32434.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
DNA polymerase beta domain protein region
sw_5_scaffold_1817_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4861..5079)
DNA (219bp) protein (73aa)
UDP-glucose 6-dehydrogenase AglM {ECO:0000313|EMBL:CCQ37144.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CCQ37144.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
sw_5_scaffold_1817_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5187..5417)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NM92_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11300.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_5_scaffold_1817_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6018..7055)
DNA (1038bp) protein (346aa)
Glycosyl transferases group 1 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WWR2_9SPHN
putative glycosyltransferase
DNA, contig: SP636 {ECO:0000313|EMBL:GAN14340.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
sw_5_scaffold_1817_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7881..9026
DNA (1146bp) protein (382aa)
Glycosyl transferase group 1 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NM91_HALUD
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACV11299.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
sw_5_scaffold_1817_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10287..10826
DNA (540bp) protein (180aa)
Probable glycosyltransferase, type 1 {ECO:0000313|EMBL:CAI49052.2}; EC=2.4.-.- {ECO:0000313|EMBL:CAI49052.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
Probable glycosyltransferase, type 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS36_NATPD
hexosyltransferase 3
sw_5_scaffold_1817_11
unknown

Not on your lists

comp(10823..10951)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_5_scaffold_1817_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11127..11972)
DNA (846bp) protein (282aa)
sulfatase id=24648653 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Arylsulfatase A related enzyme {ECO:0000313|EMBL:ERH09786.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sulfatase
sw_5_scaffold_1817_13
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12634..13275)
DNA (642bp) protein (214aa)
Glycosyltransferase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K0L1_9EURY
Glycosyltransferase {ECO:0000313|EMBL:EMA14313.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 3379
gtr-2; glycosyltransferase
sw_5_scaffold_1817_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13290..13697)
DNA (408bp) protein (136aa)
Glycosyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMC5_9EURY
Glycosyltransferase {ECO:0000313|EMBL:ELZ24420.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
sw_5_scaffold_1817_15
unknown

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comp(13886..14365)
DNA (480bp) protein (160aa)

This feature has no annotations

sw_5_scaffold_1817_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14426..15634)
DNA (1209bp) protein (403aa)
glycosyl transferase family 1 n=1 Tax=Halomicrobium katesii RepID=UPI0003719D84
LPS glycosyltransferase {ECO:0000313|EMBL:EMA10201.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
group 1 glycosyl transferase
sw_5_scaffold_1817_17
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15638..16567)
DNA (930bp) protein (310aa)
Nucleoside-diphosphate-sugar epimerase ( dTDP-glucose 4,6-dehydratase) n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PQE7_9EURY
Nucleoside-diphosphate-sugar epimerase (DTDP-glucose 4,6-dehydratase) {ECO:0000313|EMBL:EMA71070.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
gmd; GDP-D-mannose dehydratase
sw_5_scaffold_1817_18
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16671..17834)
DNA (1164bp) protein (388aa)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:AKH97418.1}; EC=1.1.1.22 {ECO:0000313|EMBL:AKH97418.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PNI6_9EURY
sw_5_scaffold_1817_19
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17893..18810)
DNA (918bp) protein (306aa)
Glycosyltransferase AglG n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C3C4_9EURY
family 2 glycosyl transferase
Glycosyltransferase AglG {ECO:0000313|EMBL:ELZ17700.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13
sw_5_scaffold_1817_20
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19615..20703)
DNA (1089bp) protein (363aa)
DUF2029 family protein n=2 Tax=Halobacterium salinarum RepID=B0R7I8_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG20405.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_5_scaffold_1817_21
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20839..21162
DNA (324bp) protein (108aa)
Sugar nucleotidyltransferase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BCZ8_9EURY
Sugar nucleotidyltransferase {ECO:0000313|EMBL:ELZ08705.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotoler
dTDP-glucose pyrophosphorylase
Displaying 21 items

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