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sw_5_scaffold_187

Search features with annotation key words

Displaying items 1-30 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_187_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..527
DNA (525bp) protein (175aa)
dUTP diphosphatase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUB0_9EURY
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:EFW92189.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="H
sw_5_scaffold_187_2
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(615..1193)
DNA (579bp) protein (193aa)
hypothetical protein id=24624155 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Putative membrane protein {ECO:0000313|EMBL:ERG99663.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50
hypothetical protein
sw_5_scaffold_187_3
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1217..1495)
DNA (279bp) protein (93aa)
Zinc finger CHY domain protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PDU4_9EURY
Zinc finger CHY domain protein {ECO:0000313|EMBL:EMA68018.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 139
hypothetical protein
sw_5_scaffold_187_4
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1666..2142
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X8W6_9EURY
UPF0212 protein C491_10399 {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyti
hypothetical protein
sw_5_scaffold_187_5
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2221..2457)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AIR5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY98261.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
UPF0058 family protein
sw_5_scaffold_187_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2606..3010
DNA (405bp) protein (135aa)
Translation initiation factor 2 subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIK3_9EURY
translation initiation factor IF-2 subunit beta
Translation initiation factor 2 subunit beta {ECO:0000256|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; TaxID=797114 species="Archaea
sw_5_scaffold_187_7
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3007..3186)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JWM5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37171.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_5_scaffold_187_8

Not on your lists

comp(3230..3511)
DNA (282bp) protein (94aa)
Uncharacterized protein conserved in archaea n=1 Tax=uncultured archaeon A07HR67 RepID=V4XT34_9ARCH
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:ESS03271.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_5_scaffold_187_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3558..4373)
DNA (816bp) protein (272aa)
CAAX amino terminal protease family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR00_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EMA48026.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
hypothetical protein
sw_5_scaffold_187_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4538..5794)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6T8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53637.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_187_11
unknown

Not on your lists

comp(6132..6554)
DNA (423bp) protein (141aa)

This feature has no annotations

sw_5_scaffold_187_12
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6924..8930
DNA (2007bp) protein (669aa)
DNA mismatch repair protein MutL n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BBA3_9EURY
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena the
DNA mismatch repair protein MutL
sw_5_scaffold_187_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9113..10744)
DNA (1632bp) protein (544aa)
FAD dependent oxidoreductase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HPI5_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:ESP89804.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus H
choline dehydrogenase-like flavoprotein
sw_5_scaffold_187_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10741..11274)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRB4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47284.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
gluconate 2-dehydrogenase subunit 3
sw_5_scaffold_187_15
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11673..11822
DNA (150bp) protein (50aa)
Ferredoxin {ECO:0000313|EMBL:ERH04348.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
sw_5_scaffold_187_16
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11927..12922
DNA (996bp) protein (332aa)
Transcription initiation factor IIB n=3 Tax=Haloarcula RepID=G0HV41_HALHT
transcription initiation factor IIB 2
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
sw_5_scaffold_187_trna_1
unknown

Not on your lists

12974..13046
DNA (73bp)
transferRNA
sw_5_scaffold_187_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13631..14590)
DNA (960bp) protein (320aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IEM1_9EURY
Alpha/beta hydrolase {ECO:0000313|EMBL:AHG03708.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
alpha/beta hydrolase fold-3 domain protein
sw_5_scaffold_187_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14713..15054
DNA (342bp) protein (114aa)
Cupin n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N465_9EURY
Cupin 2 barrel domain-containing protein
Cupin {ECO:0000313|EMBL:EMA52732.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
sw_5_scaffold_187_19
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15102..16373
DNA (1272bp) protein (424aa)
Kynureninase {ECO:0000256|PIRNR:PIRNR038800, ECO:0000313|EMBL:EMA27868.1}; EC=3.7.1.3 {ECO:0000256|PIRNR:PIRNR038800};; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
Kynureninase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L458_9EURY
kynureninase
sw_5_scaffold_187_20
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16442..17722)
DNA (1281bp) protein (427aa)
Membrane lipoprotein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH79_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH97806.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
sw_5_scaffold_187_21
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17793..18401)
DNA (609bp) protein (203aa)
msrA; peptide methionine sulfoxide reductase (S-form specific) id=24634212 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:ERG97005.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum
msrA; peptide methionine sulfoxide reductase (S-form specific)
sw_5_scaffold_187_22

Not on your lists

comp(18401..18862)
DNA (462bp) protein (154aa)
msrB1; peptide methionine sulfoxide reductase MsrB (R-form specific) (EC:1.8.4.12)
Methionine-R-sulfoxide reductase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XY73_9ARCH
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ESS05176.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_5_scaffold_187_23

Not on your lists

comp(18901..20871)
DNA (1971bp) protein (657aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MH70_9ARCH
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AEN06316.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_187_24
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21714..22811
DNA (1098bp) protein (366aa)
GMP reductase (EC:1.7.1.7)
GMP reductase {ECO:0000313|EMBL:AEH38438.1}; EC=1.7.1.7 {ECO:0000313|EMBL:AEH38438.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Ha
GMP reductase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCX0_HALXS
sw_5_scaffold_187_25

Not on your lists

comp(23440..24114)
DNA (675bp) protein (225aa)
Putative endoIII-related endonuclease n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZU29_9ARCH
Putative endoIII-related endonuclease {ECO:0000313|EMBL:ESS06335.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
HhH-GPD family protein
sw_5_scaffold_187_26
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24383..24928)
DNA (546bp) protein (182aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
ribonuclease P n=1 Tax=Halorubrum sp. T3 RepID=UPI00036E9877
Ribonuclease P-related protein
sw_5_scaffold_187_27
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24925..25650)
DNA (726bp) protein (242aa)
Ribonuclease P protein component 3 {ECO:0000256|HAMAP-Rule:MF_00756}; Short=RNase P component 3 {ECO:0000256|HAMAP-Rule:MF_00756};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00756};; Rpp30 {ECO:0000256|H
Ribonuclease P protein component 3 n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0ASF0_NATA1
RNase P subunit p30
sw_5_scaffold_187_28
unknown

Not on your lists

comp(25767..25952)
DNA (186bp) protein (62aa)

This feature has no annotations

sw_5_scaffold_187_29
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26408..27133
DNA (726bp) protein (242aa)
Prephenate dehydratase {ECO:0000313|EMBL:AKH98496.1}; EC=4.2.1.51 {ECO:0000313|EMBL:AKH98496.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halana
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6CTU7_9EURY
Displaying items 1-30 of 70 in total

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