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sw_5_scaffold_188

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_188_1
unknown

Not on your lists

comp(3..530)
DNA (528bp) protein (176aa)

This feature has no annotations

sw_5_scaffold_188_2
unknown

Not on your lists

comp(517..1110)
DNA (594bp) protein (198aa)
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
sw_5_scaffold_188_3
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1204..1740)
DNA (537bp) protein (179aa)
Hsp20-type molecular chaperone n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JAG3_9EURY
Hsp20-type molecular chaperone {ECO:0000313|EMBL:EMA06102.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans AT
hsp20_2; hsp20-type chaperone
sw_5_scaffold_188_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1826..2617)
DNA (792bp) protein (264aa)
CAAX amino terminal protease family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N500_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EMA52199.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
hypothetical protein
sw_5_scaffold_188_5
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2742..3626
DNA (885bp) protein (295aa)
Protein-export membrane protein SecF n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LQC0_HALLT
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccha
preprotein translocase subunit SecF
sw_5_scaffold_188_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3623..5227
DNA (1605bp) protein (535aa)
Protein-export membrane protein SecD n=1 Tax=Halogranum salarium B-1 RepID=J2ZYT6_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
secD; preprotein translocase subunit SecD
sw_5_scaffold_188_7
unknown

Not on your lists

comp(5233..5442)
DNA (210bp) protein (70aa)

This feature has no annotations

sw_5_scaffold_188_8
unknown

Not on your lists

5490..5741
DNA (252bp) protein (84aa)

This feature has no annotations

sw_5_scaffold_188_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6020..6958)
DNA (939bp) protein (313aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQG1_9EURY
Pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta {ECO:0000313|EMBL:EMA35807.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit
sw_5_scaffold_188_10
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6951..8825)
DNA (1875bp) protein (625aa)
2-oxoglutarate synthase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AMZ8_NATA1
2-ketoglutarate ferredoxin oxidoreductase subunit alpha
2-ketoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:AHF99202.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source
sw_5_scaffold_188_11
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9156..10058)
DNA (903bp) protein (301aa)
PfkB domain protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JR18_NATP1
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ELY71628.1}; Sugar kinase, ribokinase {ECO:0000313|EMBL:AGB33263.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natr
sw_5_scaffold_188_12
unknown

Not on your lists

comp(10178..10798)
DNA (621bp) protein (207aa)

This feature has no annotations

sw_5_scaffold_188_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10859..11599)
DNA (741bp) protein (247aa)
PREDICTED: trichohyalin-like, partial n=1 Tax=Homo sapiens RepID=UPI000387CB04
Uncharacterized protein {ECO:0000313|EMBL:EMA17032.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
sw_5_scaffold_188_14
unknown

Not on your lists

comp(12736..13491)
DNA (756bp) protein (252aa)

This feature has no annotations

sw_5_scaffold_188_15
unknown

Not on your lists

comp(13784..14638)
DNA (855bp) protein (285aa)

This feature has no annotations

sw_5_scaffold_188_16
unknown

Not on your lists

comp(14682..15236)
DNA (555bp) protein (185aa)

This feature has no annotations

sw_5_scaffold_188_17
unknown

Not on your lists

comp(15244..15456)
DNA (213bp) protein (71aa)

This feature has no annotations

sw_5_scaffold_188_18

Not on your lists

comp(15517..16101)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4XMU6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS09714.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_5_scaffold_188_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16104..16805)
DNA (702bp) protein (234aa)
DsbA-like thioredoxin domain-containing protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P162_HALMD
thioredoxin
DsbA-like thioredoxin domain-containing protein {ECO:0000313|EMBL:ACV49077.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomic
sw_5_scaffold_188_20
unknown

Not on your lists

16923..17552
DNA (630bp) protein (210aa)

This feature has no annotations

sw_5_scaffold_188_21
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17618..19288
DNA (1671bp) protein (557aa)
nadE; NAD(+) synthase (glutamine-hydrolyzing) (EC:6.3.5.1)
NAD(+) synthase (Glutamine-hydrolyzing) n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ERZ5_9EURY
NAD(+) synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ELZ50465.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum cori
sw_5_scaffold_188_22
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

19328..19651
DNA (324bp) protein (108aa)
# 4 # 741 # -1 # ;gc_cont=0.434 id=18311402 bin=Haloredivivus tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK02369.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
Displaying 22 items

View Taxonomy