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sw_5_scaffold_195

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_195_1
unknown

Not on your lists

comp(1..258)
DNA (258bp) protein (86aa)

This feature has no annotations

sw_5_scaffold_195_2
Corynebacterium callunae, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(288..1073)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00036996E7
hypothetical protein
Group 1 glycosyl transferase {ECO:0000313|EMBL:AGG65767.1}; TaxID=1121353 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium callunae
sw_5_scaffold_195_3
Sulfolobus solfataricus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(1451..2242)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=2 Tax=Sulfolobus solfataricus RepID=Q7LXE1_SULSO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK41132.1}; TaxID=273057 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus solfataricus (strain AT
sw_5_scaffold_195_4
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2258..3604)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LLM3_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC40829.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_5_scaffold_195_5
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(3776..4234)
DNA (459bp) protein (153aa)
pseudaminic acid synthase (EC:2.5.1.56); K15898 pseudaminic acid synthase [EC:2.5.1.97] Tax=RBG_13_Nitrospirae_43_8_curated
N-acylneuraminate-9-phosphate synthase (EC:2.5.1.57)
N-acetylneuraminate synthase n=1 Tax=Salisaeta longa RepID=UPI0003B626E2
sw_5_scaffold_195_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4483..4713)
DNA (231bp) protein (77aa)
CMP-N-acetlyneuraminic acid synthetase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] id=24657461 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
CMP-N-acetlyneuraminic acid synthetase
CMP-N-acetlyneuraminic acid synthetase {ECO:0000313|EMBL:ABC43898.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_5_scaffold_195_7
Brevibacillus agri, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5037..5462
DNA (426bp) protein (142aa)
transposase n=1 Tax=Salisaeta longa RepID=UPI0003B38027
Transposase mutator type {ECO:0000313|EMBL:ELK38848.1}; TaxID=1246477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus agri BAB-2500.;"
hypothetical protein
sw_5_scaffold_195_8
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5575..6024
DNA (450bp) protein (150aa)
transposase n=1 Tax=Salisaeta longa RepID=UPI0003B38027
Transposase mutator type {ECO:0000313|EMBL:EED07608.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldariu
transposase mutator type
sw_5_scaffold_195_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6034..6273
DNA (240bp) protein (80aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW26_SALRM
Transposase
Transposase {ECO:0000313|EMBL:CBH22855.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
sw_5_scaffold_195_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6270..6446)
DNA (177bp) protein (59aa)
CMP-N-acetlyneuraminic acid synthetase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4Y0_SALRD
CMP-N-acetlyneuraminic acid synthetase
CMP-N-acetlyneuraminic acid synthetase {ECO:0000313|EMBL:ABC43898.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_5_scaffold_195_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6443..6679)
DNA (237bp) protein (79aa)
mannose-1-phosphate guanyltransferase
mannose-1-phosphate guanyltransferase id=24657460 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative mannose-1-phosphate guanyltransferase {ECO:0000313|EMBL:ABC45760.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
sw_5_scaffold_195_12
unknown

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6714..6908
DNA (195bp) protein (65aa)

This feature has no annotations

sw_5_scaffold_195_13
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7136..7804)
DNA (669bp) protein (223aa)
Glycosyltransferase n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4T5L9_9GAMM
Glycosyltransferase {ECO:0000313|EMBL:ERL56200.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter aquaticu
family 2 glycosyl transferase
sw_5_scaffold_195_14
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(7801..8655)
DNA (855bp) protein (285aa)
rmlD; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RBG_16_Chloroflexi_48_8_curated
rmlD; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] id=1244732 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
dTDP-4-dehydrorhamnose reductase
sw_5_scaffold_195_15

Not on your lists

comp(8796..9860)
DNA (1065bp) protein (355aa)
flagellar protein FlgA n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B742B1
Marine sediment metagenome DNA, contig: S12H4_C00309 {ECO:0000313|EMBL:GAI62508.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
N-acetylneuraminate synthase
sw_5_scaffold_195_16
Anoxybacillus gonensis, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9884..10609)
DNA (726bp) protein (242aa)
acylneuraminate cytidylyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B33B08
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:KGP60616.1}; TaxID=198467 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus gonensis.;"
spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase
sw_5_scaffold_195_17
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11277..11783)
DNA (507bp) protein (169aa)
Haloacid dehalogenase domain-containing protein hydrolase type 3 Tax=GWF2_Lentisphaerae_44_16_curated
Methyltransferase type 11 id=3414598 bin=GWF2_Lentisphaerae_52_8 species=Clostridium sporogenes genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
pseudaminic acid biosynthesis-associated methylase
sw_5_scaffold_195_18
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12168..13169)
DNA (1002bp) protein (334aa)
N-acetyl glucosamine/N-acetyl galactosamine epimerase n=1 Tax=Salisaeta longa RepID=UPI0003B3C39C
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KHE90635.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua
UDP-N-acetylglucosamine 4,6-dehydratase
sw_5_scaffold_195_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13241..15049)
DNA (1809bp) protein (603aa)
ABC transporter, multidrug efflux family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4Z0_SALRD
multidrug ABC transporter
ABC transporter, multidrug efflux family {ECO:0000313|EMBL:ABC44713.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_5_scaffold_195_20
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(16082..16393)
DNA (312bp) protein (104aa)
hypothetical protein Tax=RBG_16_KB1_OP1_55_9_curated
sw_5_scaffold_195_21
unknown

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comp(16523..16618)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_5_scaffold_195_22
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(16781..16969)
DNA (189bp) protein (63aa)
Putative toxin-antitoxin system, antitoxin component n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L673_9BACT
hypothetical protein Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein
sw_5_scaffold_195_23
unknown

Not on your lists

17090..17836
DNA (747bp) protein (249aa)

This feature has no annotations

sw_5_scaffold_195_24
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17869..18153)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFR1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ETW98929.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
sw_5_scaffold_195_25
unknown

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comp(18146..18394)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_5_scaffold_195_26
unknown

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comp(18404..18670)
DNA (267bp) protein (89aa)

This feature has no annotations

sw_5_scaffold_195_27
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18758..19315)
DNA (558bp) protein (186aa)
capsular exopolysaccharide family (EC:2.7.10.2)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B40D31
Capsular biosynthesis protein {ECO:0000313|EMBL:KGK89561.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
sw_5_scaffold_195_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19260..20120)
DNA (861bp) protein (287aa)
Tyrosine-protein kinase {ECO:0000313|EMBL:CBH23166.1}; EC=2.7.10.2 {ECO:0000313|EMBL:CBH23166.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B40D31
wzc; Tyrosine-protein kinase
sw_5_scaffold_195_29
unknown

Not on your lists

20430..20846
DNA (417bp) protein (139aa)

This feature has no annotations

Displaying 29 items

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