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sw_5_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 71 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_42_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(68..523)
DNA (456bp) protein (152aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=NDK_NATPD
sw_5_scaffold_42_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(523..990)
DNA (468bp) protein (156aa)
30S ribosomal protein L24e n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP40_9EURY
30S ribosomal protein L24e
30S ribosomal protein L24e {ECO:0000313|EMBL:CCQ32792.1}; 50S ribosomal protein L24e {ECO:0000313|EMBL:ERJ07172.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
sw_5_scaffold_42_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(993..1217)
DNA (225bp) protein (75aa)
30S ribosomal protein S28e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRL3_NATM8
rps28e; 30S ribosomal protein S28e
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_5_scaffold_42_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1228..1590)
DNA (363bp) protein (121aa)
50S ribosomal protein L7Ae n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL7A_NATPD
rpl7ae; 50S ribosomal protein L7Ae
50S ribosomal protein L7Ae {ECO:0000255|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000255|HAMAP-Rule:MF_00326}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_5_scaffold_42_5
unknown

Not on your lists

1959..2081
DNA (123bp) protein (41aa)

This feature has no annotations

sw_5_scaffold_42_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2063..2485
DNA (423bp) protein (141aa)
Ferritin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRI3_NATM8
dpsA1; ferritin
Ferritin {ECO:0000313|EMBL:CCQ36874.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain DSM 1867
sw_5_scaffold_42_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2623..2763)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPN1_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49919.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_42_8
unknown

Not on your lists

comp(2822..3421)
DNA (600bp) protein (200aa)

This feature has no annotations

sw_5_scaffold_42_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3512..4150
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPN2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49918.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_42_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4192..4551)
DNA (360bp) protein (120aa)
Nucleic-acid-binding protein containing a zn-ribbon n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQ24_HALBP
nucleic-acid-binding protein containing a zn-ribbon
Nucleic-acid-binding protein containing a zn-ribbon {ECO:0000313|EMBL:ELY23549.1}; Predicted nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:ADQ67769.1}; TaxID=469382 species="Ar
sw_5_scaffold_42_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4548..5702)
DNA (1155bp) protein (385aa)
acaB1; acetyl-CoA C-acyltransferase (EC:2.3.1.16)
Acetyl-CoA C-acetyltransferase catalytic subunit {ECO:0000313|EMBL:CCQ36870.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CCQ36870.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
Acetyl-CoA C-acyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL09_NATM8
sw_5_scaffold_42_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6010..7164
DNA (1155bp) protein (385aa)
ABC-type transport system ATP-binding protein (Probable substrate iron) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPN5_NATPD
abc24a; spermidine/putrescine/iron ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein {ECO:0000313|EMBL:CAI49915.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_5_scaffold_42_13
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7556..8200
DNA (645bp) protein (215aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:ELZ00387.1}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:ELZ00387.1};; IGP synth
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0APX9_NATA1
imidazole glycerol phosphate synthase subunit hisH
sw_5_scaffold_42_14
unknown

Not on your lists

comp(8187..8417)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_5_scaffold_42_15
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8436..8906
DNA (471bp) protein (157aa)
DNA binding protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0ANS3_NATA1
DNA binding protein {ECO:0000313|EMBL:ELZ00386.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 700177 /
boa8; bacterio-opsin activator
sw_5_scaffold_42_16
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8963..9871
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0APC3_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELZ00385.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
sw_5_scaffold_42_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10909..11304
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=I7KXQ2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCI69573.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_42_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11294..12238
DNA (945bp) protein (315aa)
XerC/D-like integrase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPN8_NATPD
tyrosine recombinase
XerC/D-like integrase {ECO:0000313|EMBL:CAI49911.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_5_scaffold_42_19
unknown

Not on your lists

12310..12414
DNA (105bp) protein (35aa)

This feature has no annotations

sw_5_scaffold_42_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12492..14819)
DNA (2328bp) protein (776aa)
ATP-dependent helicase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJE2_9EURY
ATP-dependent helicase {ECO:0000313|EMBL:ELZ22753.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
DEAD/DEAH box helicase
sw_5_scaffold_42_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14844..15734)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQD1_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49665.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_42_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15787..17019)
DNA (1233bp) protein (411aa)
Probable coiled coil protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQD0_NATPD
transducer protein
Probable coiled coil protein {ECO:0000313|EMBL:CAI49666.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_5_scaffold_42_23
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18422..19354
DNA (933bp) protein (311aa)
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41)
5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0AC61_9EURY
5-dehydro-4-deoxyglucarate dehydratase {ECO:0000313|EMBL:ELY96350.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanens
sw_5_scaffold_42_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19458..20693
DNA (1236bp) protein (412aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8M2_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA54312.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
Mandelate racemase/muconate lactonizing protein
sw_5_scaffold_42_25
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20626..21048)
DNA (423bp) protein (141aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:ADB63211.1}; EC=4.1.3.39 {ECO:0000313|EMBL:ADB63211.1};; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Hal
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1G4_HALTV
sw_5_scaffold_42_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21566..22795
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TTV9_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA54310.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
Glucarate dehydratase
sw_5_scaffold_42_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22858..24021
DNA (1164bp) protein (388aa)
galactonate dehydratase (EC:4.2.1.6)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCC5_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ELZ19992.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
sw_5_scaffold_42_28
unknown

Not on your lists

24097..24462
DNA (366bp) protein (122aa)

This feature has no annotations

sw_5_scaffold_42_29
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24583..25434
DNA (852bp) protein (284aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DD98_HALXS
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEH38987.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (
sw_5_scaffold_42_30
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26164..27309)
DNA (1146bp) protein (382aa)
Glycerol-3-phosphate-transporting ATPase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L0F3_HALJP
Glycerol-3-phosphate-transporting ATPase {ECO:0000313|EMBL:EMA27027.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
ABC transporter
Displaying items 1-30 of 71 in total

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