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sw_5_scaffold_422

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_422_1
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..825)
DNA (825bp) protein (275aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1E6_HALMD
replication factor A
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ACM55742.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
sw_5_scaffold_422_2
Sulfurihydrogenibium sp. YO3AOP1, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

1054..1794
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Streptococcus urinalis FB127-CNA-2 RepID=K8MVZ9_9STRE
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=436114 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogenibium sp
sw_5_scaffold_422_3
unknown

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comp(1791..2372)
DNA (582bp) protein (194aa)

This feature has no annotations

sw_5_scaffold_422_4
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2678..3709
DNA (1032bp) protein (344aa)
DNA repair and recombination protein RadA n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EKI5_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348, ECO:0000313|EMBL:ELZ47578.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
DNA repair and recombination protein rada
sw_5_scaffold_422_5
unknown

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comp(3717..4181)
DNA (465bp) protein (155aa)

This feature has no annotations

sw_5_scaffold_422_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4269..5960
DNA (1692bp) protein (564aa)
Replication factor C large subunit n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W057_9EURY
replication factor C large subunit
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256
sw_5_scaffold_422_7
unknown

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comp(5953..6336)
DNA (384bp) protein (128aa)

This feature has no annotations

sw_5_scaffold_422_8
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6377..8086)
DNA (1710bp) protein (570aa)
M50 metallopeptidase n=3 Tax=Haloarcula RepID=Q5UXX7_HALMA
M50 metallopeptidase
M50 metallopeptidase {ECO:0000313|EMBL:AAV47876.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain
sw_5_scaffold_422_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8133..9797)
DNA (1665bp) protein (555aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=751944 species="Archaea; Eu
DNA ligase n=1 Tax=Halobacterium sp. DL1 RepID=G4IEZ7_9EURY
ATP-dependent DNA ligase
sw_5_scaffold_422_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9854..10960)
DNA (1107bp) protein (369aa)
Putative periplasmic serine proteinase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QR61_9EURY
Putative periplasmic serine proteinase {ECO:0000313|EMBL:EFW92969.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatu
serine protease
sw_5_scaffold_422_11
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11116..11697
DNA (582bp) protein (194aa)
GCN5-related N-acetyltransferase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EMK3_9EURY
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ELZ48122.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DS
GCN5-related N-acetyltransferase
sw_5_scaffold_422_12
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11755..12243)
DNA (489bp) protein (163aa)
outer membrane receptor protein Tax=CG_Flavo_01
sw_5_scaffold_422_13
unknown

Not on your lists

12592..12978
DNA (387bp) protein (129aa)

This feature has no annotations

sw_5_scaffold_422_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15590..16678)
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWQ2_9EURY
Peptide chain release factor 1 {ECO:0000313|EMBL:EFW91148.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucih
erf1; peptide chain release factor 1
sw_5_scaffold_422_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16779..17411
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F8J3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ56275.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_5_scaffold_422_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17619..18866
DNA (1248bp) protein (416aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=268739 species="Archaea; Eur
DNA gyrase subunit B n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQV8_NATM8
Displaying 16 items

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