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sw_5_scaffold_4436

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_4436_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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229..564
DNA (336bp) protein (112aa)
Transcription regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JD35_HALJB
transcription regulator
Transcription regulator {ECO:0000313|EMBL:ADJ17188.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_5_scaffold_4436_2
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(955..1761)
DNA (807bp) protein (269aa)
fadA1; enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XDE4_9EURY
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ELY58638.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius inne
sw_5_scaffold_4436_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1858..3063)
DNA (1206bp) protein (402aa)
mat; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000255|HAMAP-Rule:MF_00136}; Short=AdoMet synthase {ECO:0000255|HAMAP-Rule:MF_00136};; EC=2.5.1.6 {ECO:0000255|HAMAP-Rule:MF_00136};; Methionine adenosyltransferase
S-adenosylmethionine synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNP6_NATM8
sw_5_scaffold_4436_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3150..3725)
DNA (576bp) protein (192aa)
Adenylate cyclase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP29_9EURY
Adenylate cyclase {ECO:0000313|EMBL:ELZ25000.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
adenylate cyclase
sw_5_scaffold_4436_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3842..4900
DNA (1059bp) protein (353aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQG0_NATPD
mtfK_2; FKBP-type peptidylprolyl isomerase 2
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_5_scaffold_4436_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5262..5882)
DNA (621bp) protein (207aa)
GTP cyclohydrolase MptA {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.39 {ECO:0000256|HAMAP-Rule:MF_01527};; GTP cyclohydrolase IV {ECO:0000256|HAMAP-Rule:MF_01527}; TaxID=485914 species="Archaea; Eurya
GTP cyclohydrolase MptA n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3M5_HALMD
GTP cyclohydrolase
sw_5_scaffold_4436_7
unknown

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5927..6139
DNA (213bp) protein (71aa)

This feature has no annotations

sw_5_scaffold_4436_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6235..7059)
DNA (825bp) protein (275aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=797114 species="Archaea; Euryarchaeota;
NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTH7_9EURY
sw_5_scaffold_4436_9
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7201..8094
DNA (894bp) protein (298aa)
circadian clock protein, KaiC n=1 Tax=Halomicrobium katesii RepID=UPI00035CC4B9
kaiC2; circadian regulator
Circadian regulator {ECO:0000313|EMBL:EMA12822.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 3380
sw_5_scaffold_4436_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8096..8707)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2V0_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47422.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_4436_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8730..9035)
DNA (306bp) protein (102aa)
DNA-binding protein NP_4416A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Y4416_NATPD
hypothetical protein
DNA-binding protein NP_4416A {ECO:0000255|HAMAP-Rule:MF_00026}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phar
sw_5_scaffold_4436_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9075..10946)
DNA (1872bp) protein (624aa)
ABC-1 domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3P8_HALMD
ABC transporter
ABC-1 domain protein {ECO:0000313|EMBL:ACV47720.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (st
sw_5_scaffold_4436_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11114..12283
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93269.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_4436_14
unknown

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12378..13058
DNA (681bp) protein (227aa)

This feature has no annotations

sw_5_scaffold_4436_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13033..13560)
DNA (528bp) protein (176aa)
PAS sensor protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D005_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELZ28795.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
sw_5_scaffold_4436_16
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13711..13923)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0L1A3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA27326.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
bacteriocin biosynthesis docking scaffold, SagD family
Displaying 16 items

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