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sw_5_scaffold_452

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_452_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..154
DNA (153bp) protein (51aa)
ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=268739 species
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZI0_NATM8
sw_5_scaffold_452_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(608..1567)
DNA (960bp) protein (320aa)
Probable ADP-ribosylglycohydrolase {ECO:0000313|EMBL:CAI50030.1}; EC=3.2.2.- {ECO:0000313|EMBL:CAI50030.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Probable ADP-ribosylglycohydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC1_NATPD
ADP-ribosylglycohydrolase
sw_5_scaffold_452_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1570..2307)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00037C7E08
adaptin n terminal region protein
Adaptin {ECO:0000313|EMBL:ELY30425.1}; Adaptin N terminal region protein {ECO:0000313|EMBL:ADQ66919.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halog
sw_5_scaffold_452_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2282..3136)
DNA (855bp) protein (285aa)
Armadillo/beta-catenin-like repeat protein id=24645952 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10173.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
Armadillo/beta-catenin-like repeat protein
sw_5_scaffold_452_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3136..5205)
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKY4_NATM8
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ36736.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_452_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5470..7092
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR86_NATM8
hypothetical protein rbh
AAA-type ATPase domain protein {ECO:0000313|EMBL:CCQ36735.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_5_scaffold_452_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7163..7477)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSE0_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66929.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_5_scaffold_452_8
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7746..8414)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI000362E636
Uncharacterized protein {ECO:0000313|EMBL:ELZ58481.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 1011
sw_5_scaffold_452_9
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8392..8532)
DNA (141bp) protein (47aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI000362E636
Uncharacterized protein {ECO:0000313|EMBL:ELZ58481.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 1011
sw_5_scaffold_452_10
unknown

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comp(8761..9183)
DNA (423bp) protein (141aa)

This feature has no annotations

sw_5_scaffold_452_11
unknown

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9279..9380
DNA (102bp) protein (34aa)

This feature has no annotations

sw_5_scaffold_452_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9568..9738
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JI53_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61574.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_452_13

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10506..11144
DNA (639bp) protein (213aa)
Mg-chelatase subunit ChlD n=1 Tax=uncultured archaeon A07HR60 RepID=V4YGJ5_9ARCH
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:ESS10402.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
von Willebrand factor type A
sw_5_scaffold_452_14
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12266..12715)
DNA (450bp) protein (150aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1)
Proteasome subunit beta 2 {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit 2 {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein Ps
Proteasome subunit beta 2 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=PSB2_HALTV
sw_5_scaffold_452_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12892..13617)
DNA (726bp) protein (242aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVQ5_HALMD
Displaying 15 items

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