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sw_5_scaffold_458

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_458_1
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..1321
DNA (1320bp) protein (440aa)
IS1341-type transposase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JTF5_NATP1
transposase, IS605 OrfB family, central region
IS1341-type transposase {ECO:0000313|EMBL:ELY69393.1}; Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:AGB33902.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrial
sw_5_scaffold_458_2
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1332..2483)
DNA (1152bp) protein (384aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZRX7_9EURY
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:ELY88317.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 122
sw_5_scaffold_458_3
unknown

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comp(2542..2997)
DNA (456bp) protein (152aa)

This feature has no annotations

sw_5_scaffold_458_4
unknown

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comp(3066..3305)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_5_scaffold_458_5
unknown

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3440..3589
DNA (150bp) protein (50aa)

This feature has no annotations

sw_5_scaffold_458_6

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comp(3698..4549)
DNA (852bp) protein (284aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V5AB94_9ARCH
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:ESS13000.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter, ATP-binding/permease protein
sw_5_scaffold_458_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4767..5540)
DNA (774bp) protein (258aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTW4_HALBP
multidrug ABC transporter ATPase/permease
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:ADQ68269.1}; Multidrug ABC transporter ATPase/permease {ECO:0000313|EMBL:ELY24688.1}; TaxID=469382 species="Archaea
sw_5_scaffold_458_8
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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5677..6390
DNA (714bp) protein (238aa)
Putative EndoIII-related endonuclease n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBZ9_9EURY
Putative EndoIII-related endonuclease {ECO:0000313|EMBL:EGQ39797.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J0
HhH-GPD family protein
sw_5_scaffold_458_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6460..7317
DNA (858bp) protein (286aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J740_HALJB
sw_5_scaffold_458_10
unknown

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7395..7790
DNA (396bp) protein (132aa)

This feature has no annotations

sw_5_scaffold_458_11
unknown

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7855..8289
DNA (435bp) protein (145aa)

This feature has no annotations

sw_5_scaffold_458_12
unknown

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8336..8800
DNA (465bp) protein (155aa)

This feature has no annotations

sw_5_scaffold_458_13
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(8855..10021)
DNA (1167bp) protein (389aa)
HD superfamily phosphohydrolase n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QC40_9EURY
HD superfamily phosphohydrolase {ECO:0000313|EMBL:EGQ39838.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56)
Metal dependent phosphohydrolase
sw_5_scaffold_458_14
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10118..10471
DNA (354bp) protein (118aa)
DNA-binding tfar19-related protein; K06875 programmed cell death protein 5 id=24636475 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
DNA-binding protein J07HR59_01097 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J0
DNA-binding protein
sw_5_scaffold_458_15
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10468..10713)
DNA (246bp) protein (82aa)
UPF0213 protein VNG_2274C n=2 Tax=Halobacterium salinarum RepID=Y2274_HALSA
hypothetical protein
UPF0213 family protein {ECO:0000313|EMBL:CAP14692.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_5_scaffold_458_16
unknown

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comp(10740..10967)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_5_scaffold_458_17
unknown

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comp(11095..11484)
DNA (390bp) protein (130aa)

This feature has no annotations

sw_5_scaffold_458_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11534..13141)
DNA (1608bp) protein (536aa)
Protein-export membrane protein SecD n=1 Tax=Halogranum salarium B-1 RepID=J2ZYT6_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
secD; preprotein translocase subunit SecD
sw_5_scaffold_458_19
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13138..14010)
DNA (873bp) protein (291aa)
Protein-export membrane protein SecF n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NML7_HALBP
protein translocase subunit secf
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeomet
sw_5_scaffold_458_20
unknown

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comp(14170..14649)
DNA (480bp) protein (160aa)

This feature has no annotations

sw_5_scaffold_458_21
unknown

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comp(14732..15256)
DNA (525bp) protein (175aa)

This feature has no annotations

sw_5_scaffold_458_22
unknown

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comp(15343..15717)
DNA (375bp) protein (125aa)

This feature has no annotations

sw_5_scaffold_458_23
unknown

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comp(15795..16046)
DNA (252bp) protein (84aa)

This feature has no annotations

sw_5_scaffold_458_24
unknown

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comp(16094..16564)
DNA (471bp) protein (157aa)

This feature has no annotations

Displaying 24 items

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