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sw_5_scaffold_476

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_476_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..193)
DNA (192bp) protein (64aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2F1_HALMD
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV49266.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_5_scaffold_476_2
unknown

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283..768
DNA (486bp) protein (162aa)

This feature has no annotations

sw_5_scaffold_476_3
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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964..1782
DNA (819bp) protein (273aa)
Transposase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X158_9EURY
Transposase {ECO:0000313|EMBL:ELY55347.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.;"
tnp1; IS1341-type transposase (TCE31)
sw_5_scaffold_476_4
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1760..2212
DNA (453bp) protein (151aa)
Transposase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JYQ0_9EURY
Transposase {ECO:0000313|EMBL:EMA13603.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;"
tnp; transposase
sw_5_scaffold_476_5
unknown

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2378..3055
DNA (678bp) protein (226aa)

This feature has no annotations

sw_5_scaffold_476_6
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3139..3768
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IBG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ94096.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
sw_5_scaffold_476_7
unknown

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3813..4238
DNA (426bp) protein (142aa)

This feature has no annotations

sw_5_scaffold_476_8
unknown

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comp(4219..4518)
DNA (300bp) protein (100aa)

This feature has no annotations

sw_5_scaffold_476_9
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4631..4942)
DNA (312bp) protein (104aa)
50S ribosomal protein L12 n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BJ13_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077
50S ribosomal protein L12P
sw_5_scaffold_476_10
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4997..5623)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F8J3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH96963.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
sw_5_scaffold_476_11
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5626..6396)
DNA (771bp) protein (257aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BS67_9EURY
aspartyl/glutamyl-tRNA amidotransferase subunit B
sw_5_scaffold_476_12
unknown

Not on your lists

comp(6446..6691)
DNA (246bp) protein (82aa)

This feature has no annotations

sw_5_scaffold_476_13
unknown

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6812..7273
DNA (462bp) protein (154aa)

This feature has no annotations

sw_5_scaffold_476_14
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7304..8836)
DNA (1533bp) protein (511aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AN51_NATGS
lysyl-tRNA synthetase
sw_5_scaffold_476_15
unknown

Not on your lists

comp(9311..9739)
DNA (429bp) protein (143aa)

This feature has no annotations

sw_5_scaffold_476_16
unknown

Not on your lists

9831..9971
DNA (141bp) protein (47aa)

This feature has no annotations

sw_5_scaffold_476_17
unknown

Not on your lists

10007..10396
DNA (390bp) protein (130aa)

This feature has no annotations

sw_5_scaffold_476_18
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10915..11805
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y147_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY67819.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_5_scaffold_476_19

Not on your lists

comp(11806..12777)
DNA (972bp) protein (324aa)
Nucleoside-diphosphate-sugar pyrophosphorylase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XGL1_9ARCH
Nucleoside-diphosphate-sugar pyrophosphorylase {ECO:0000313|EMBL:ESS07269.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
graD_7; sugar nucleotidyltransferase
sw_5_scaffold_476_20
unknown

Not on your lists

comp(12869..13297)
DNA (429bp) protein (143aa)

This feature has no annotations

Displaying 20 items

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