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sw_5_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_52_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..771)
DNA (771bp) protein (257aa)
UPF0272 protein C442_14370 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KCZ6_9EURY
UPF0272 protein C442_14370 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyti
hypothetical protein
sw_5_scaffold_52_2
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

965..3184
DNA (2220bp) protein (740aa)
ATPase AAA (EC:3.6.4.6)
CdcH n=1 Tax=Halorubrum sp. T3 RepID=UPI0003803B2B
ATPase AAA {ECO:0000313|EMBL:ELZ29046.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
sw_5_scaffold_52_3
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3243..3920)
DNA (678bp) protein (226aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FDY7_9EURY
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" so
phosphate uptake regulator PhoU
sw_5_scaffold_52_4
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4041..5735)
DNA (1695bp) protein (565aa)
HTR-like protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R106_HALMT
htlD25; HTR-like protein
HTR-like protein {ECO:0000313|EMBL:AFK17916.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain ATCC 3350
sw_5_scaffold_52_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6049..6933)
DNA (885bp) protein (295aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter ATP-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQ91_HALVA
pstB1; phosphate ABC transporter ATP-binding protein
sw_5_scaffold_52_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6933..8549)
DNA (1617bp) protein (539aa)
Phosphate ABC transporter permease n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQN7_HALVA
Phosphate ABC transporter permease {ECO:0000313|EMBL:EMA11306.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallis
pstA; phosphate transport system permease protein PstA (TC 3.A.1.7.1)
sw_5_scaffold_52_7
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8551..9495)
DNA (945bp) protein (315aa)
phosphate ABC transporter inner membrane subunit PstC; K02037 phosphate transport system permease protein id=24636512 bin=Halorubrum_J07HR59 species=Halorubrum sp. J07HR59 genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halorubrum_J07HR59
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:ERH03997.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
phosphate ABC transporter inner membrane subunit PstC
sw_5_scaffold_52_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9550..10593)
DNA (1044bp) protein (348aa)
Phosphate ABC transporter substrate-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JTK4_HALVA
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA11304.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
pstS2; phosphate ABC transporter substrate-binding protein
sw_5_scaffold_52_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10867..11868
DNA (1002bp) protein (334aa)
Phosphate uptake regulator n=1 Tax=Halogranum salarium B-1 RepID=J3A074_9EURY
Phosphate uptake regulator {ECO:0000313|EMBL:EJN58698.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
phoU; ABC transport system regulatory protein
sw_5_scaffold_52_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11961..12338)
DNA (378bp) protein (126aa)
30S ribosomal protein S8e n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TZP4_9EURY
30S ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;
sw_5_scaffold_52_11

Not on your lists

comp(12674..12955)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XNL4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS03628.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_5_scaffold_52_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13064..13567
DNA (504bp) protein (168aa)
hypothetical protein id=24615191 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88360.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_5_scaffold_52_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13567..13965
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HKD4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88359.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_5_scaffold_52_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14033..14941
DNA (909bp) protein (303aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
pyridoxal biosynthesis protein n=1 Tax=Halomicrobium katesii RepID=UPI00036D2FDA
pyridoxal biosynthesis lyase PdxS
sw_5_scaffold_52_15
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15032..15916)
DNA (885bp) protein (295aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000313|EMBL:ELZ82646.1}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HA
homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TYS5_9EURY
sw_5_scaffold_52_16
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15987..16238)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DD68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33415.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_5_scaffold_52_17

Not on your lists

comp(16269..16541)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1QKP3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESS05220.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_5_scaffold_52_18
unknown

Not on your lists

comp(16643..17188)
DNA (546bp) protein (182aa)

This feature has no annotations

sw_5_scaffold_52_19
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17189..17416
DNA (228bp) protein (76aa)
Transcriptional reguator CopG-Arc-MetJ family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQA2_9EURY
transcriptional regulator-like protein, CopG/Arc/MetJ family protein
Transcriptional reguator CopG-Arc-MetJ family protein {ECO:0000313|EMBL:ERJ04986.1}; Transcriptional regulator-like protein, CopG/Arc/MetJ family protein {ECO:0000313|EMBL:CCQ33230.1}; TaxID=1033806 s
sw_5_scaffold_52_20
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17456..17815
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V253_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46399.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_5_scaffold_52_21

Not on your lists

17964..18254
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XKC9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS02408.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_5_scaffold_52_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18559..19440
DNA (882bp) protein (294aa)
ArNOG08307 family NADH-binding domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1M0_NATM8
nolA2; arNOG08307 family NADH-binding domain protein rbh
ArNOG08307 family NADH-binding domain protein {ECO:0000313|EMBL:CCQ36371.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_5_scaffold_52_23
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19437..19853)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Haloarcula hispanica (strain ATCC 33960 / DSM 4426 / JCM 8911 / NBRC 102182 / NCIMB 2187 / VKM B-1755) RepID=G0HRN9_HALHT
Uncharacterized protein {ECO:0000313|EMBL:EMA21315.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_5_scaffold_52_24
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19922..20683)
DNA (762bp) protein (254aa)
hypothetical protein id=24649789 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10872.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_5_scaffold_52_25
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20755..21099)
DNA (345bp) protein (115aa)
Signal transduction protein with CBS domain protein n=1 Tax=Halogranum salarium B-1 RepID=J3JE55_9EURY
Signal transduction protein with CBS domain protein {ECO:0000313|EMBL:EJN58071.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum sala
signal transduction protein with CBS domains
sw_5_scaffold_52_26
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21357..21650
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Haloferax sp. BAB2207 RepID=L5NUB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELK54246.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
hypothetical protein
sw_5_scaffold_52_27
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21668..21985)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=M0K3M8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA26947.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_5_scaffold_52_28
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22372..23244)
DNA (873bp) protein (291aa)
galE5; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQ81_HALAR
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA22354.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
sw_5_scaffold_52_29
unknown

Not on your lists

comp(23357..23653)
DNA (297bp) protein (99aa)

This feature has no annotations

sw_5_scaffold_52_30

Not on your lists

comp(23702..24742)
DNA (1041bp) protein (347aa)
Zn-dependent alcohol dehydrogenase n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y1U5_9ARCH
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:ESS08623.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
molecular chaperone GroES
Displaying items 1-30 of 36 in total

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