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sw_5_scaffold_5430

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_5430_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..807
DNA (807bp) protein (269aa)
MATE efflux family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPQ4_NATPD
multidrug efflux protein norM-like protein
MATE efflux family protein {ECO:0000313|EMBL:CAI49894.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
sw_5_scaffold_5430_2

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comp(910..1332)
DNA (423bp) protein (141aa)
Universal stress protein UspA related nucleotide-binding protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YKE9_9ARCH
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ESS11957.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
UspA domain protein
sw_5_scaffold_5430_3

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comp(1375..1776)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YAD9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11958.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_5_scaffold_5430_4
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2388..2744)
DNA (357bp) protein (119aa)
Probable oxidoreductase (Aldo-keto reductase family protein) {ECO:0000313|EMBL:CAP13267.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAP13267.1};; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halob
Aldehyde reductase n=2 Tax=Halobacterium salinarum RepID=Q9HS02_HALSA
oxidoreductase (aldo-keto reductase family protein)
sw_5_scaffold_5430_5
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3341..4528
DNA (1188bp) protein (396aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EAR4_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ELZ44860.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
major facilitator superfamily MFS_1
sw_5_scaffold_5430_6

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comp(4749..5144)
DNA (396bp) protein (132aa)
PIN domain protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4XMG8_9ARCH
PIN domain protein {ECO:0000313|EMBL:ESS09609.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
twitching motility protein PilT
sw_5_scaffold_5430_7

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comp(5149..5376)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y486_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS09608.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_5_scaffold_5430_8
unknown

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comp(5657..6256)
DNA (600bp) protein (200aa)

This feature has no annotations

sw_5_scaffold_5430_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7484..8248
DNA (765bp) protein (255aa)
Probable amidase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INC9_NATPD
amidase
Probable amidase {ECO:0000313|EMBL:CAI50374.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain AT
sw_5_scaffold_5430_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8275..8841
DNA (567bp) protein (189aa)
Probable amidase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INC9_NATPD
amidase
Probable amidase {ECO:0000313|EMBL:CAI50374.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain AT
sw_5_scaffold_5430_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8792..9646)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBT2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05084.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_5_scaffold_5430_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9770..10534)
DNA (765bp) protein (255aa)
Ferredoxin n=4 Tax=Haloarcula RepID=Q5V492_HALMA
ferA3; ferredoxin
Ferredoxin {ECO:0000313|EMBL:EMA13746.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;"
sw_5_scaffold_5430_13
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10878..11543
DNA (666bp) protein (222aa)
Electron-transferring-flavoprotein dehydrogenase 1 n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W429_9EURY
Electron-transferring-flavoprotein dehydrogenase 1 {ECO:0000313|EMBL:ELY44077.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Nat
FAD-dependent oxidoreductase (homolog to geranylgeranyl reductase)
sw_5_scaffold_5430_14
unknown

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11600..11914
DNA (315bp) protein (105aa)

This feature has no annotations

sw_5_scaffold_5430_15
unknown

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comp(12188..12487)
DNA (300bp) protein (100aa)

This feature has no annotations

sw_5_scaffold_5430_16
unknown

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comp(12572..12886)
DNA (315bp) protein (105aa)

This feature has no annotations

sw_5_scaffold_5430_17
unknown

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comp(12939..13082)
DNA (144bp) protein (48aa)

This feature has no annotations

sw_5_scaffold_5430_18
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(13298..13834)
DNA (537bp) protein (179aa)
ABC-2 type transporter n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9V9_HALXS
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:AEH35736.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18
Displaying 18 items

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