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sw_5_scaffold_5514

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_5514_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..1531)
DNA (1530bp) protein (510aa)
Type II/IV secretion system ATPase protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQF2_NATPD
ATPase
Type II/IV secretion system ATPase protein {ECO:0000313|EMBL:CAI49644.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
sw_5_scaffold_5514_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1697..2152
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35554.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_5514_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2154..2399)
DNA (246bp) protein (82aa)
hypothetical protein id=24646880 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH11043.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_5_scaffold_5514_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2431..3081)
DNA (651bp) protein (217aa)
DNA binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N480_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA51914.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
Bacterio-opsin activator HTH domain protein
sw_5_scaffold_5514_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3205..3507
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQY5_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36587.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_5514_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3588..4376
DNA (789bp) protein (263aa)
hypothetical protein id=24654768 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89715.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_5_scaffold_5514_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4409..5680
DNA (1272bp) protein (424aa)
livJ4; branched-chain amino acids ABC transporter substrate-binding protein id=24630673 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ERG92966.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
livJ1; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
sw_5_scaffold_5514_8
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5785..6546)
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HPA5_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ86425.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;"
branched-chain amino acid ABC transporter ATPase
sw_5_scaffold_5514_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6543..7007)
DNA (465bp) protein (155aa)
Amino acid/amide ABC transporter ATP-binding protein 1, haat family n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E6N6_9EURY
Amino acid/amide ABC transporter ATP-binding protein 1, haat family {ECO:0000313|EMBL:ELZ42592.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubru
amino acid/amide ABC transporter ATP-binding protein 1, haat family
sw_5_scaffold_5514_10
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7098..7358
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
sw_5_scaffold_5514_11
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7422..7553)
DNA (132bp) protein (44aa)
ABC-type branched-chain amino acid transport system, permease protein II {ECO:0000313|EMBL:ELZ78629.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halo
sw_5_scaffold_5514_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7553..8737)
DNA (1185bp) protein (395aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRS2_HALBP
branched-chain amino acid ABC transporter permease
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ADQ66859.1}; Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELY30367.1}; TaxID=469382 sp
sw_5_scaffold_5514_13
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8734..9903)
DNA (1170bp) protein (390aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=halophilic archaeon J07HB67 RepID=U1PQN7_9EURY
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH12751.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
amino acid/amide ABC transporter membrane protein 1, haat family
sw_5_scaffold_5514_14
unknown

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comp(10064..10288)
DNA (225bp) protein (75aa)

This feature has no annotations

sw_5_scaffold_5514_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11065..11592
DNA (528bp) protein (176aa)
GNAT family acetyltransferase (EC:2.3.1.-)
GNAT family acetyltransferase {ECO:0000313|EMBL:CCQ36595.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCQ36595.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y287_NATM8
sw_5_scaffold_5514_16
unknown

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11897..12349
DNA (453bp) protein (151aa)

This feature has no annotations

sw_5_scaffold_5514_17
unknown

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12582..12716
DNA (135bp) protein (45aa)

This feature has no annotations

sw_5_scaffold_5514_18
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12796..12987)
DNA (192bp) protein (64aa)
HTR-like protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JK24_9EURY
HTR-like protein {ECO:0000313|EMBL:EMA15421.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.;
phoR; PhoR protein-like
Displaying 18 items

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