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sw_5_scaffold_554

Search features with annotation key words

Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_554_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

sw_5_scaffold_554_2
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

119..1417
DNA (1299bp) protein (433aa)
Transcriptional regulator, MarR family n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RV56_HALTV
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADB61257.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" sourc
sw_5_scaffold_554_3

Not on your lists

1609..2358
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J6L6_HALVA
Sugar phosphate isomerases/epimerase {ECO:0000313|EMBL:ESS05844.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_5_scaffold_554_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2442..2855)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1P094_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09970.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_5_scaffold_554_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2884..3207)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PK61_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10494.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_5_scaffold_554_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3319..3489
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:ACV47563.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
sw_5_scaffold_554_7
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3482..4333
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1N985_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG99659.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
hypothetical protein
sw_5_scaffold_554_8
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4401..4943)
DNA (543bp) protein (181aa)
Carboxymuconolactone decarboxylase n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VNY6_HALJB
Carboxymuconolactone decarboxylase
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ELY38692.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoc
sw_5_scaffold_554_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5121..5585)
DNA (465bp) protein (155aa)
PAS fold domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPL9_9EURY
PAS fold domain-containing protein {ECO:0000313|EMBL:ELZ24342.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carl
PAS fold domain-containing protein
sw_5_scaffold_554_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5672..6970)
DNA (1299bp) protein (433aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=122748
Probable cobyrinic acid A,C-diamide synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DI97_9EURY
cobyrinic acid a,c-diamide synthase
sw_5_scaffold_554_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7028..7816)
DNA (789bp) protein (263aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NEK7_9EURY
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:EMA56422.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
cobalamin (vitamin B12) biosynthesis CbiX protein
sw_5_scaffold_554_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8010..8774)
DNA (765bp) protein (255aa)
Cobalt-precorrin-6Y C(5)-methyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGQ8_9EURY
Cobalt-precorrin-6Y C(5)-methyltransferase {ECO:0000313|EMBL:ELZ33907.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
cobalt-precorrin-6Y C(5)-methyltransferase
sw_5_scaffold_554_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8771..9502)
DNA (732bp) protein (244aa)
cbiC; precorrin-8X methylmutase (EC:5.4.1.2)
Precorrin-8X methylmutase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGH6_9EURY
Precorrin-8X methylmutase {ECO:0000313|EMBL:ELZ33908.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
sw_5_scaffold_554_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9492..9878)
DNA (387bp) protein (129aa)
Glutamyl-tRNA reductase {ECO:0000313|EMBL:EMA56425.1}; EC=1.2.1.70 {ECO:0000313|EMBL:EMA56425.1};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
Glutamyl-tRNA reductase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NID1_9EURY
sw_5_scaffold_554_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9868..13950)
DNA (4083bp) protein (1361aa)
CobN/magnesium chelatase (EC:6.6.1.2)
Cobaltochelatase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DIA2_9EURY
Cobaltochelatase {ECO:0000313|EMBL:ELZ33909.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1484
sw_5_scaffold_554_16
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13985..16036
DNA (2052bp) protein (684aa)
magnesium chelatase (EC:6.6.1.1)
Protporphyrin IX magnesium chelatase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEL8_9EURY
Protporphyrin IX magnesium chelatase {ECO:0000313|EMBL:ELZ33910.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometric
sw_5_scaffold_554_17
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16095..16283
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H742_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ80305.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_5_scaffold_554_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16286..17059
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4F4_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47976.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
sw_5_scaffold_554_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17056..17460
DNA (405bp) protein (135aa)
Cobalamin cluster protein CbiX 2 (Ferredoxin-like iron-sulfur protein) n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGI2_9EURY
Cobalamin cluster protein CbiX 2 (Ferredoxin-like iron-sulfur protein) {ECO:0000313|EMBL:ELZ33913.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloge
(2Fe-2S) ferredoxin
sw_5_scaffold_554_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17619..18974)
DNA (1356bp) protein (452aa)
Tup1 like transcriptional repressor n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NIA6_9EURY
Tup1 like transcriptional repressor {ECO:0000313|EMBL:EMA56400.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
pyrrolo-quinoline quinone
sw_5_scaffold_554_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18967..19338)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEM3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33915.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_5_scaffold_554_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19347..20573)
DNA (1227bp) protein (409aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEJ6_9EURY
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:ELZ33916.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
cobalamin (vitamin B12) biosynthesis CbiX protein
sw_5_scaffold_554_23
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20570..21286)
DNA (717bp) protein (239aa)
Cobalamin operon protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGR8_9EURY
Cobalamin operon protein {ECO:0000313|EMBL:ELZ33917.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
cobalamin operon protein
sw_5_scaffold_554_24
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21279..21536)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGI8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33918.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_5_scaffold_554_25
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21526..22602)
DNA (1077bp) protein (359aa)
Precorrin-3B C(17)-methyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NIB1_9EURY
Precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:EMA56405.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
precorrin-3B C(17)-methyltransferase
sw_5_scaffold_554_26
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22605..23501)
DNA (897bp) protein (299aa)
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEN1_9EURY
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase {ECO:0000313|EMBL:ELZ33920.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeom
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
sw_5_scaffold_554_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23503..24534)
DNA (1032bp) protein (344aa)
Cobalamin biosynthesis protein CbiG n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEK3_9EURY
Cobalamin biosynthesis protein CbiG {ECO:0000313|EMBL:ELZ33921.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
cobalamin biosynthesis protein CbiG
sw_5_scaffold_554_28
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24538..25404)
DNA (867bp) protein (289aa)
precorrin-4 C(11)-methyltransferase (EC:2.1.1.133)
Precorrin-4 C(11)-methyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGS4_9EURY
Precorrin-4 C(11)-methyltransferase {ECO:0000313|EMBL:ELZ33922.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
sw_5_scaffold_554_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25401..26255)
DNA (855bp) protein (285aa)
Cobalt-precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:EMA53206.1}; EC=2.1.1.151 {ECO:0000313|EMBL:EMA53206.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
Cobalt-precorrin-2 C(20)-methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5Q2_9EURY
cobalt-precorrin-2 C(20)-methyltransferase
sw_5_scaffold_554_30
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26252..26590)
DNA (339bp) protein (113aa)
cbiT; precorrin-8W decarboxylase (EC:1.-.-.-)
Precorrin-8W decarboxylase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DIB9_9EURY
Precorrin-8W decarboxylase {ECO:0000313|EMBL:ELZ33924.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidu
Displaying items 1-30 of 48 in total

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