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sw_5_scaffold_557

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_557_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..173)
-----------------
DNA (171bp)
protein (57aa)
Transcriptional regulator n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JTE1_NATP1
Transcriptional regulator, TrmB {ECO:0000313|EMBL:AHG05547.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp.
transcriptional regulator
sw_5_scaffold_557_2
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(592..1161)
-----------------
DNA (570bp)
protein (190aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IM73_NATPD
Uncharacterized protein {ECO:0000313|EMBL:KDE57869.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein rbh
sw_5_scaffold_557_3
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1158..1556)
-----------------
DNA (399bp)
protein (133aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IM72_NATPD
Uncharacterized protein {ECO:0000313|EMBL:AKH97446.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
sw_5_scaffold_557_4

Not on your lists

comp(1626..1940)
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein n=2 Tax=Archaea RepID=B9LVJ2_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07352.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_557_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1955..2416)
-----------------
DNA (462bp)
protein (154aa)
TrmB family transcription regulator n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LM91_HALWC
TrmB family transcription regulator
TrmB family transcription regulator {ECO:0000313|EMBL:CCC41211.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum wal
sw_5_scaffold_557_6
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2430..2576)
-----------------
DNA (147bp)
protein (49aa)
TrmB family transcription regulator n=2 Tax=Halobacterium salinarum RepID=B0R8Q6_HALS3
Transcriptional regulator {ECO:0000313|EMBL:KDE59568.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_5_scaffold_557_7
unknown

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comp(3278..5101)
-----------------
DNA (1824bp)
protein (608aa)

This feature has no annotations

sw_5_scaffold_557_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5157..6575
-----------------
DNA (1419bp)
protein (473aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NIV7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56999.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_5_scaffold_557_9
unknown

Not on your lists

7583..8110
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

sw_5_scaffold_557_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8306..8578
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein
hypothetical protein id=24627301 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG90065.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
sw_5_scaffold_557_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8579..8911
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18G81_HALWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ53019.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_5_scaffold_557_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8999..9631)
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CUZ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27030.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_5_scaffold_557_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10047..10295)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDA2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57314.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_557_14

Not on your lists

11359..12378
-----------------
DNA (1020bp)
protein (340aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MLW3_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05790.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_557_15
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12972..13415)
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein n=2 Tax=Archaea RepID=B9LVU5_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58335.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_5_scaffold_557_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13412..13987)
-----------------
DNA (576bp)
protein (192aa)
Uncharacterized protein n=3 Tax=Archaea RepID=B9LVU4_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02828.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_5_scaffold_557_17
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14440..15096)
-----------------
DNA (657bp)
protein (219aa)
NmrA family protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EQE2_9EURY
NmrA family protein {ECO:0000313|EMBL:ELZ49112.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
NmrA family protein
sw_5_scaffold_557_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15214..15621
-----------------
DNA (408bp)
protein (136aa)
HxlR family transcriptional regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTN0_9EURY
HxlR family transcriptional regulator {ECO:0000313|EMBL:EMA36917.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
HxlR family transcriptional regulator
sw_5_scaffold_557_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15773..15949
-----------------
DNA (177bp)
protein (59aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQF3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24863.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
Displaying 19 items

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