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sw_5_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_57_1
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..118)
-----------------
DNA (117bp)
protein (39aa)
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=2 Tax=Halobacterium salinarum RepID=ATKA_HALSA
ATPase {ECO:0000313|EMBL:KKF40143.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
sw_5_scaffold_57_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(121..210)
-----------------
DNA (90bp)
protein (30aa)
F subunit of K+-transporting ATPase {ECO:0000313|EMBL:KKF40142.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovor
sw_5_scaffold_57_3
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

432..1136
-----------------
DNA (705bp)
protein (235aa)
TrkA domain protein n=2 Tax=Halobacterium salinarum RepID=B0R9L7_HALS3
trkA2; TRK potassium uptake system protein
TrkA domain protein {ECO:0000313|EMBL:CAP15444.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (stra
sw_5_scaffold_57_4
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1194..3134)
-----------------
DNA (1941bp)
protein (647aa)
Smc-like protein Sph2 n=2 Tax=Halobacterium salinarum RepID=SPH2_HALS3
sph2; SMC-like protein sph2
Smc-like protein Sph2; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strain ATCC 700922 / JCM 11081 /
sw_5_scaffold_57_5
unknown

Not on your lists

3191..3349
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

sw_5_scaffold_57_6
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3512..4114)
-----------------
DNA (603bp)
protein (201aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKC8_NATP1
Uncharacterized protein {ECO:0000313|EMBL:KDS92185.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_5_scaffold_57_7
unknown

Not on your lists

5504..5707
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

sw_5_scaffold_57_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5927..6769)
-----------------
DNA (843bp)
protein (281aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MS17_9EURY
5-carboxymethyl-2-hydroxymuconate delta-isomerase {ECO:0000313|EMBL:EMA48163.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
5-carboxymethyl-2-hydroxymuconate delta-isomerase
sw_5_scaffold_57_9
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6961..8115)
-----------------
DNA (1155bp)
protein (385aa)
transposase IS605 n=1 Tax=Halorubrum sp. T3 RepID=UPI00037EAEA5
Transposase {ECO:0000313|EMBL:ELZ37195.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
transposase, IS605 OrfB family, central region
sw_5_scaffold_57_10
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8120..8533)
-----------------
DNA (414bp)
protein (138aa)
Transposase IS200-family protein n=2 Tax=Halobacteriaceae RepID=M0DNW7_9EURY
Transposase IS200-family protein {ECO:0000313|EMBL:EMA57520.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JC
transposase IS200-family protein
sw_5_scaffold_57_11
unknown

Not on your lists

8615..9247
-----------------
DNA (633bp)
protein (211aa)

This feature has no annotations

sw_5_scaffold_57_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9270..10133)
-----------------
DNA (864bp)
protein (288aa)
Amidohydrolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DD24_9EURY
Amidohydrolase {ECO:0000313|EMBL:ELZ32637.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
hypothetical protein
sw_5_scaffold_57_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10135..10941)
-----------------
DNA (807bp)
protein (269aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DCV5_9EURY
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ELZ32638.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
sw_5_scaffold_57_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11160..11948
-----------------
DNA (789bp)
protein (263aa)
Short-chain family oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9S0_9EURY
Short-chain family oxidoreductase {ECO:0000313|EMBL:ELZ19980.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carls
short-chain dehydrogenase/reductase SDR
sw_5_scaffold_57_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11988..12452)
-----------------
DNA (465bp)
protein (155aa)
UspA domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB24_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:EMA54304.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
UspA domain-containing protein
sw_5_scaffold_57_16
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12515..12859)
-----------------
DNA (345bp)
protein (115aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C0R5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ15489.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
sw_5_scaffold_57_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12938..13900
-----------------
DNA (963bp)
protein (321aa)
Mannonate dehydratase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWI1_9EURY
Mannonate dehydratase {ECO:0000313|EMBL:EFW91077.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
Mannonate dehydratase
sw_5_scaffold_57_18
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13910..14806)
-----------------
DNA (897bp)
protein (299aa)
SMP-30/gluconolaconase/LRE-like region-containing protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WA43_9EURY
SMP-30/gluconolaconase/LRE-like region-containing protein
SMP-30/gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:AGN02304.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" sour
sw_5_scaffold_57_19
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14859..15686)
-----------------
DNA (828bp)
protein (276aa)
ABC-type sugar transport system, ATPase component n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1NA17_9EURY
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:ERG99984.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Ha
hypothetical protein
sw_5_scaffold_57_20
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15683..16699)
-----------------
DNA (1017bp)
protein (339aa)
transporter permease id=24624619 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component {ECO:0000313|EMBL:ERG99983.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
hypothetical protein
sw_5_scaffold_57_21
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16733..17866)
-----------------
DNA (1134bp)
protein (378aa)
ribose ABC transporter extracellular binding protein; K10439 ribose transport system substrate-binding protein id=24624618 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:ERG99982.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" sourc
hypothetical protein
sw_5_scaffold_57_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17918..19015)
-----------------
DNA (1098bp)
protein (366aa)
Oxidoreductase domain protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GXV8_9EURY
Oxidoreductase domain protein {ECO:0000313|EMBL:ESP89996.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
oxidoreductase domain-containing protein
sw_5_scaffold_57_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19089..20291)
-----------------
DNA (1203bp)
protein (401aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Glycerol-3-phosphate-transporting ATPase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MR31_9EURY
Glycerol-3-phosphate-transporting ATPase {ECO:0000313|EMBL:EMA48182.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_5_scaffold_57_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20314..21195)
-----------------
DNA (882bp)
protein (294aa)
ABC transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MRD3_9EURY
ABC transporter {ECO:0000313|EMBL:EMA48181.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ABC transporter
sw_5_scaffold_57_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21195..22145)
-----------------
DNA (951bp)
protein (317aa)
ABC transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUP2_9EURY
ABC transporter {ECO:0000313|EMBL:EMA48180.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ABC transporter
sw_5_scaffold_57_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22166..23698)
-----------------
DNA (1533bp)
protein (511aa)
Family 1 extracellular solute-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTT8_9EURY
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:EMA48179.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
family 1 extracellular solute-binding protein
sw_5_scaffold_57_27
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23813..25159)
-----------------
DNA (1347bp)
protein (449aa)
hypothetical protein id=24624605 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Uncharacterized protein {ECO:0000313|EMBL:ERG99971.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
hypothetical protein
sw_5_scaffold_57_28
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25250..26389)
-----------------
DNA (1140bp)
protein (380aa)
Altronate dehydratase-like protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B6J7_NATA1
Altronate dehydratase-like protein {ECO:0000313|EMBL:ELZ05893.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strai
Altronate dehydratase-like protein
sw_5_scaffold_57_29
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26389..26697)
-----------------
DNA (309bp)
protein (103aa)
Dehydratase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B8B3_NATA1
Dehydratase {ECO:0000313|EMBL:ELZ05894.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 700177 / DSM 122
dehydratase
sw_5_scaffold_57_30
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26694..27878)
-----------------
DNA (1185bp)
protein (395aa)
Altronate dehydratase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6I7_HALJB
Altronate dehydratase
Altronate dehydratase {ECO:0000313|EMBL:ADJ13864.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali
Displaying items 1-30 of 59 in total

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