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sw_5_scaffold_571

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_571_1
unknown

Not on your lists

comp(2..178)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_5_scaffold_571_2
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(219..1145)
DNA (927bp) protein (309aa)
UDP-glucose 4-epimerase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BEH7_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ELZ08708.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
nucleoside-diphosphate-sugar epimerase
sw_5_scaffold_571_3
unknown

Not on your lists

1233..1508
DNA (276bp) protein (92aa)

This feature has no annotations

sw_5_scaffold_571_4
unknown

Not on your lists

comp(1497..1754)
DNA (258bp) protein (86aa)

This feature has no annotations

sw_5_scaffold_571_5
unknown

Not on your lists

comp(1812..2213)
DNA (402bp) protein (134aa)

This feature has no annotations

sw_5_scaffold_571_6
unknown

Not on your lists

comp(2267..2596)
DNA (330bp) protein (110aa)

This feature has no annotations

sw_5_scaffold_571_7

Not on your lists

comp(2649..2831)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM77560.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sw_5_scaffold_571_8
unknown

Not on your lists

2931..3122
DNA (192bp) protein (64aa)

This feature has no annotations

sw_5_scaffold_571_9
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3172..4056
DNA (885bp) protein (295aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Halonotius sp. J07HN4 RepID=U1QKY0_9EURY
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:ERH06167.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="H
multidrug ABC transporter ATPase
sw_5_scaffold_571_10
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4058..5884
DNA (1827bp) protein (609aa)
ABC-type Na+ efflux pump permease component-like protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4U4_HALXS
Na+ ABC efflux pump permease
ABC-type Na+ efflux pump permease component-like protein {ECO:0000313|EMBL:AEH37566.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Ha
sw_5_scaffold_571_11
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5877..6656
DNA (780bp) protein (260aa)
ABC-2 type transporter n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BXM8_9EURY
ABC-2 type transporter {ECO:0000313|EMBL:ELZ14852.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans DS
sodium ABC transporter permease
sw_5_scaffold_571_12
unknown

Not on your lists

6625..6870
DNA (246bp) protein (82aa)

This feature has no annotations

sw_5_scaffold_571_13
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6867..8216)
DNA (1350bp) protein (450aa)
CCA-adding protein (EC:2.7.7.72)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D562_HALXS
sw_5_scaffold_571_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8349..9173
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M9Z2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41225.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
putative metal-dependent phosphoesterase, PHP family
sw_5_scaffold_571_15
unknown

Not on your lists

9319..9525
DNA (207bp) protein (69aa)

This feature has no annotations

sw_5_scaffold_571_16
unknown

Not on your lists

9518..9760
DNA (243bp) protein (81aa)

This feature has no annotations

sw_5_scaffold_571_17
unknown

Not on your lists

comp(9834..10172)
DNA (339bp) protein (113aa)

This feature has no annotations

sw_5_scaffold_571_18

Not on your lists

comp(10241..10855)
DNA (615bp) protein (205aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
psmB; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=uncultured archaeon A07HB70 RepID=V4XVI9_9ARCH
sw_5_scaffold_571_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10848..11561)
DNA (714bp) protein (238aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DHW2_9EURY
20S proteasome subunit alpha or beta
sw_5_scaffold_571_20
unknown

Not on your lists

comp(11615..11878)
DNA (264bp) protein (88aa)

This feature has no annotations

sw_5_scaffold_571_21
unknown

Not on your lists

11921..12274
DNA (354bp) protein (118aa)

This feature has no annotations

sw_5_scaffold_571_22
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12320..13105
DNA (786bp) protein (262aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Putative glycerophosphodiester phosphodiesterase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W474_9EURY
Putative glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:ELY44284.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natro
sw_5_scaffold_571_23
unknown

Not on your lists

13187..13684
DNA (498bp) protein (166aa)

This feature has no annotations

sw_5_scaffold_571_24
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13766..15187
DNA (1422bp) protein (474aa)
Polysaccharide biosynthesis protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CC33_9EURY
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ELZ19449.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena sali
sw_5_scaffold_571_25
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15230..15634
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GG87_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ70533.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
hypothetical protein
sw_5_scaffold_571_26
unknown

Not on your lists

15766..16164
DNA (399bp) protein (133aa)

This feature has no annotations

sw_5_scaffold_571_27
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16161..17381)
DNA (1221bp) protein (407aa)
CRISPR-associated protein, Csh1 family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWL2_HALLT
CRISPR-associated protein, Csh1 family
CRISPR-associated protein, Csh1 family {ECO:0000313|EMBL:ACM58853.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusp
Displaying 27 items

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