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sw_5_scaffold_58

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_58_1

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713..2044
DNA (1332bp) protein (444aa)
PAS sensor histidine kinase n=1 Tax=uncultured archaeon A07HR67 RepID=V4X731_9ARCH
PAS sensor histidine kinase {ECO:0000313|EMBL:ESS03494.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
histidine kinase
sw_5_scaffold_58_2
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2103..6335
DNA (4233bp) protein (1411aa)
PAS sensor protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7C103_NATSJ
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:AFO59010.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_5_scaffold_58_3

Not on your lists

comp(6549..7565)
DNA (1017bp) protein (339aa)
Actin-like ATPase involved in cell morphogenesis n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIA6_9ARCH
Actin-like ATPase involved in cell morphogenesis {ECO:0000313|EMBL:ESS11082.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_5_scaffold_58_4

Not on your lists

comp(7704..8627)
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Archaea RepID=V4YDI1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11081.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein rbh
sw_5_scaffold_58_5
unknown

Not on your lists

comp(8720..9019)
DNA (300bp) protein (100aa)

This feature has no annotations

sw_5_scaffold_58_6
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9016..9435)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. J07HR59 RepID=U1P054_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH03214.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
hypothetical protein
sw_5_scaffold_58_7
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9508..9954)
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH03212.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
uncharacterized LOC100925999 id=24635178 bin=Halorubrum_J07HR59 species=Halorubrum sp. J07HR59 genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halorubrum_J07HR59
hypothetical protein
sw_5_scaffold_58_8
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10162..11394
DNA (1233bp) protein (411aa)
CAIB/BAIF family protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0ANW8_9EURY
CAIB/BAIF family protein {ECO:0000313|EMBL:ELY99637.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
baiF1; CAIB/BAIF family protein
sw_5_scaffold_58_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11394..12488
DNA (1095bp) protein (365aa)
(R)-citramalate synthase (EC:2.3.1.182)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZYA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57998.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_5_scaffold_58_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12507..13238)
DNA (732bp) protein (244aa)
Dehydrogenase n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PAE9_9EURY
Dehydrogenase {ECO:0000313|EMBL:ERG90527.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.;"
short-chain alcohol dehydrogenase
sw_5_scaffold_58_11
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13397..14206)
DNA (810bp) protein (270aa)
Transcriptional regulator protein-like protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7CH65_NATSJ
transcriptional regulator protein-like protein
Transcriptional regulator protein-like protein {ECO:0000313|EMBL:AFO56904.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp
sw_5_scaffold_58_12
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14450..15439
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PKF7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA70541.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_5_scaffold_58_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15550..16281)
DNA (732bp) protein (244aa)
ABC transporter related protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY7_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHG04855.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacteriu
livF; ABC-type branched-chain amino acid transport systems, ATP-binding protein II
sw_5_scaffold_58_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16278..17057)
DNA (780bp) protein (260aa)
Sulfate-transporting ATPase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY8_9EURY
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:AHG04854.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
sw_5_scaffold_58_15
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17054..18106)
DNA (1053bp) protein (351aa)
Inner-membrane translocator n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY9_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AHG04853.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source
livM; ABC-type branched-chain amino acid transport systems, permease II
sw_5_scaffold_58_16
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18106..18990)
DNA (885bp) protein (295aa)
livH2; branched-chain amino acids ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=24630389 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERG92680.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloq
livH; ABC-type branched-chain amino acid transport system, permease I
sw_5_scaffold_58_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(19015..20340)
DNA (1326bp) protein (442aa)
Extracellular ligand-binding receptor n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ1_9EURY
ABC transporter {ECO:0000313|EMBL:AHG04851.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
livJ; ABC-type branched-chain amino acid transport system, substrate-binding protein
sw_5_scaffold_58_18

Not on your lists

comp(20466..21212)
DNA (747bp) protein (249aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEN05836.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEN05836.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=halophilic archaeon DL31 RepID=G2MM09_9ARCH
sw_5_scaffold_58_19
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21310..22776)
DNA (1467bp) protein (489aa)
Aldehyde Dehydrogenase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ3_9EURY
Aldehyde dehydrogenase {ECO:0000313|EMBL:AHG04849.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
aldehyde dehydrogenase
sw_5_scaffold_58_20

Not on your lists

22860..24065
DNA (1206bp) protein (402aa)
glucose dehydrogenase, type B; L-sorbosone dehydrogenase (EC:1.1.1.-)
Glucose/sorbosone dehydrogenase n=1 Tax=uncultured archaeon A07HR60 RepID=V4YC48_9ARCH
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:ESS10561.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_5_scaffold_58_21
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24180..24980)
DNA (801bp) protein (267aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=halophilic archaeon J07HB67 RepID=U1R2K4_9EURY
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:ERH13953.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
ABC transporter integral membrane protein
sw_5_scaffold_58_22
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24973..25860)
DNA (888bp) protein (296aa)
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:ERH13954.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
ABC transporter integral membrane protein; K11075 putrescine transport system permease protein id=24651447 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
ABC transporter permease
sw_5_scaffold_58_23
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(25857..26978)
DNA (1122bp) protein (374aa)
spermidine/putrescine ABC transporter ATPase id=24651448 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:ERH13955.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic arch
spermidine/putrescine ABC transporter ATPase
sw_5_scaffold_58_24
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26975..28114)
DNA (1140bp) protein (380aa)
family 1 extracellular solute-binding protein id=24641107 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Uncharacterized protein {ECO:0000313|EMBL:ERH13956.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
spermidine/putrescine-binding periplasmic protein
sw_5_scaffold_58_25
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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28242..29594
DNA (1353bp) protein (451aa)
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family n=1 Tax=Halonotius sp. J07HN4 RepID=U1QH49_9EURY
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family {ECO:0000313|EMBL:ERH06173.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonoti
nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase
sw_5_scaffold_58_26
unknown

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comp(29791..29898)
DNA (108bp) protein (36aa)

This feature has no annotations

sw_5_scaffold_58_27
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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30303..31271
DNA (969bp) protein (323aa)
Integrase domain-containing protein SAM domain-containing protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BQC7_9EURY
Integrase domain-containing protein SAM domain-containing protein {ECO:0000313|EMBL:ELZ12533.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;"
integrase domain-containing protein SAM domain-containing protein
sw_5_scaffold_58_28
unknown

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comp(31254..31604)
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying 28 items

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