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sw_5_scaffold_611

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_611_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..430)
DNA (429bp) protein (143aa)
plasmid partitioning protein ParA n=1 Tax=Halorubrum sp. T3 RepID=UPI000361F667
parA family partitioning protein
ParA family partitioning protein {ECO:0000313|EMBL:CCQ34983.1}; SojC protein {ECO:0000313|EMBL:ERJ04925.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
sw_5_scaffold_611_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

851..1585
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Archaea RepID=B9LVC6_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58639.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_5_scaffold_611_3

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1660..2277
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Archaea RepID=B9LVC7_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07887.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_611_4
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2512..3186
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CJM1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22547.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
sw_5_scaffold_611_5
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3190..4704
DNA (1515bp) protein (505aa)
N-6 DNA methylase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CH23_9EURY
N-6 DNA methylase {ECO:0000313|EMBL:ELZ22546.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
N-6 DNA methylase
sw_5_scaffold_611_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4697..6079
DNA (1383bp) protein (461aa)
type I restriction-modification enzyme, S subunit; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] id=24615212 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Type I restriction-modification enzyme, S subunit {ECO:0000313|EMBL:ESP88376.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;"
Type I restriction-modification system specificity subunit S
sw_5_scaffold_611_7
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6066..9083
DNA (3018bp) protein (1006aa)
rmeR; type I site-specific deoxyribonuclease subunit rmeR (EC:3.1.21.3)
Type I site-specific deoxyribonuclease subunit rmeR n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CL06_9EURY
Type I site-specific deoxyribonuclease subunit rmeR {ECO:0000313|EMBL:ELZ22544.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Ha
sw_5_scaffold_611_8
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9129..9917)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CIW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22543.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
sw_5_scaffold_611_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9974..10429)
DNA (456bp) protein (152aa)
Transcriptional regulator padr-like family protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CH17_9EURY
Transcriptional regulator padr-like family protein {ECO:0000313|EMBL:ELZ22541.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Hal
sw_5_scaffold_611_10
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10422..11162)
DNA (741bp) protein (247aa)
Transcriptional regulator n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CGY4_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ22540.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 138
transcriptional regulator
sw_5_scaffold_611_11
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11354..12127
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CL02_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ22539.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
sw_5_scaffold_611_12
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12130..13092
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CIW0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22538.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_5_scaffold_611_13
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13089..13670
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CJL4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22537.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
sw_5_scaffold_611_14
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13762..14499)
DNA (738bp) protein (246aa)
Type I restriction-modification system methyltransferase subunit-like protein id=24631902 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ERG93653.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratu
restriction endonuclease subunit M
sw_5_scaffold_611_15
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14865..16058
DNA (1194bp) protein (398aa)
Cell division control protein 6 n=1 Tax=Halorubrum sp. AJ67 RepID=V6DSH3_9EURY
Cell division control protein 6 {ECO:0000313|EMBL:CDK39127.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
orc12; Orc1-type DNA replication protein
sw_5_scaffold_611_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15956..16642)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEJ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21048.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_611_17

Not on your lists

16910..17854
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MP81_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07655.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_611_18
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17857..18171
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DST1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ38530.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_5_scaffold_611_19
unknown

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comp(18362..18460)
DNA (99bp) protein (33aa)

This feature has no annotations

sw_5_scaffold_611_20
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18506..18769
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DSR5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ38531.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_5_scaffold_611_21

Not on your lists

18811..18900
DNA (90bp) protein (30aa)
Uncharacterized protein {ECO:0000313|EMBL:ESS10292.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_5_scaffold_611_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18866..19156
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D0T1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29035.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_5_scaffold_611_23
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19159..19719
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D0M8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29036.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_5_scaffold_611_24
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20519..21112
DNA (594bp) protein (198aa)
DNA polymerase I {ECO:0000313|EMBL:CDK40651.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDK40651.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
DNA polymerase I n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXP4_9EURY
DNA polymerase B region
sw_5_scaffold_611_25
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21349..22518
DNA (1170bp) protein (390aa)
DNA polymerase I {ECO:0000313|EMBL:EMA11789.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EMA11789.1};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
DNA polymerase I n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JUY9_HALVA
DNA polymerase B2
sw_5_scaffold_611_26
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23149..23490)
DNA (342bp) protein (114aa)
ORC1-type DNA replication protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JVV2_HALVA
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula val
orc1/cdc6 family replication initiation protein
Displaying 26 items

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