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sw_5_scaffold_622

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_622_1
unknown

Not on your lists

comp(1..93)
DNA (93bp) protein (31aa)

This feature has no annotations

sw_5_scaffold_622_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(698..1249)
DNA (552bp) protein (184aa)
entB; isochorismatase (EC:3.3.2.1)
Isochorismatase family protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18HX7_HALWD
Isochorismatase family protein {ECO:0000313|EMBL:CAJ52404.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi
sw_5_scaffold_622_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1253..1870)
DNA (618bp) protein (206aa)
YcgG family protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LIW1_HALWC
YcgG family protein
YcgG family protein {ECO:0000313|EMBL:CCC40363.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain DSM
sw_5_scaffold_622_4
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2202..2432)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7D0L5_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO58691.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_5_scaffold_622_5
unknown

Not on your lists

2624..3157
DNA (534bp) protein (178aa)

This feature has no annotations

sw_5_scaffold_622_6
uncultured haloarchaeon, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3503..3820
DNA (318bp) protein (106aa)
Putative uncharacterized protein {ECO:0000313|EMBL:ABQ75869.1}; TaxID=160804 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental samples.;" source="uncultur
sw_5_scaffold_622_7
unknown

Not on your lists

3795..3968
DNA (174bp) protein (58aa)

This feature has no annotations

sw_5_scaffold_622_8
unknown

Not on your lists

comp(4114..4785)
DNA (672bp) protein (224aa)

This feature has no annotations

sw_5_scaffold_622_trna_2
unknown

Not on your lists

comp(5171..5242)
DNA (72bp)
transferRNA
sw_5_scaffold_622_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5319..5627)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=4 Tax=Haloquadratum walsbyi RepID=RS10_HALWD
rps10p; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (
sw_5_scaffold_622_10
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5631..6896)
DNA (1266bp) protein (422aa)
tef1a; elongation factor 1-alpha (EC:3.6.5.3)
Elongation factor 1-alpha n=2 Tax=Halorubrum RepID=M0D7B7_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
sw_5_scaffold_622_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7035..7988)
DNA (954bp) protein (318aa)
Homoserine dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D3R4_9EURY
Homoserine dehydrogenase {ECO:0000313|EMBL:ELZ30060.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
homoserine dehydrogenase
sw_5_scaffold_622_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7985..8566)
DNA (582bp) protein (194aa)
Allosteric regulator of homoserine dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC75_9EURY
Allosteric regulator of homoserine dehydrogenase {ECO:0000313|EMBL:EMA43372.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
hypothetical protein
sw_5_scaffold_622_13
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8769..9590)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KH12_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA19105.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_5_scaffold_622_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9736..11919)
DNA (2184bp) protein (728aa)
Elongation factor 2 n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLA8_HALBP
translation elongation factor 2 (ef-2/ef-g)
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Halofer
sw_5_scaffold_622_15
unknown

Not on your lists

comp(11944..12717)
DNA (774bp) protein (258aa)

This feature has no annotations

sw_5_scaffold_622_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12869..13621
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG25_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43375.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_622_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13823..14431)
DNA (609bp) protein (203aa)
30S ribosomal protein S7 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS7_NATPD
rps7; 30S ribosomal protein S7P
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_5_scaffold_622_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14434..14862)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU20_NATM8
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
sw_5_scaffold_622_19
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15187..15609
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CRE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25208.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_5_scaffold_622_20
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15869..18052
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R5Z2_HALMT
hypothetical protein
Cell surface protein {ECO:0000313|EMBL:AHZ23040.1}; Uncharacterized protein {ECO:0000313|EMBL:AFK19652.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
sw_5_scaffold_622_21
unknown

Not on your lists

comp(18022..19005)
DNA (984bp) protein (328aa)

This feature has no annotations

sw_5_scaffold_622_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19020..19442)
DNA (423bp) protein (141aa)
Transcription elongation factor NusA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN0_NATPD
nusA; transcription elongation factor NusA-like protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source
sw_5_scaffold_622_23
Halorubrum sp. SP3, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19452..21788)
DNA (2337bp) protein (779aa)
DNA-directed RNA polymerase subunit A n=1 Tax=Halorubrum sp. T3 RepID=UPI000370045C
RNA polymerase A {ECO:0000313|EMBL:AIL25671.1}; TaxID=1537265 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. SP3.;"
RNA polymerase Rpb1 domain 5
sw_5_scaffold_622_24
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21809..22201)
DNA (393bp) protein (131aa)
RNA polymerase Rpb1 domain 5 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTX7_HALUD
RNA polymerase Rpb1 domain 5
RNA polymerase Rpb1 domain 5 {ECO:0000313|EMBL:ACV10966.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
sw_5_scaffold_622_25
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22201..23061)
DNA (861bp) protein (287aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
rpoA; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SNW0_9EURY
sw_5_scaffold_622_26
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

23271..24743
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UY44_9RHIZ
Uncharacterized protein Tax=RBG_13_Chloroflexi_68_17_curated
sw_5_scaffold_622_27
unknown

Not on your lists

24751..25041
DNA (291bp) protein (97aa)

This feature has no annotations

sw_5_scaffold_622_28
Halobellus clavatus, Halobellus, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25038..26870)
DNA (1833bp) protein (611aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=660517 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
DNA-directed RNA polymerase subunit b' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Halobellus clavatus RepID=G1FET8_9EURY
sw_5_scaffold_622_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27074..28420)
DNA (1347bp) protein (449aa)
rpoB2; DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:CAI48146.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48146.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN4_NATPD
Displaying items 1-30 of 32 in total

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