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sw_5_scaffold_624

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_624_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..658
DNA (657bp) protein (219aa)
Glycoprotein 3-alpha-L-fucosyltransferase {ECO:0000313|EMBL:ERJ06986.1}; EC=2.4.1.214 {ECO:0000313|EMBL:ERJ06986.1};; Glycosyltransferase {ECO:0000313|EMBL:CCQ34759.1}; TaxID=1033806 species="Archaea;
Glycoprotein 3-alpha-L-fucosyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PL81_9EURY
glycosyltransferase
sw_5_scaffold_624_2
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

827..1507
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BP12_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ12028.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_5_scaffold_624_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1925..2293)
DNA (369bp) protein (123aa)
5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e (EC:4.1.1.68)
Fumarylacetoacetate hydrolase domain containing 2A n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D079_9EURY
Fumarylacetoacetate hydrolase domain containing 2A {ECO:0000313|EMBL:ELZ28067.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
sw_5_scaffold_624_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2956..3714
DNA (759bp) protein (253aa)
Hydroxypyruvate isomerase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HGX0_9EURY
Hydroxypyruvate isomerase {ECO:0000313|EMBL:ESP87079.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halo
hydroxypyruvate isomerase
sw_5_scaffold_624_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3766..4248
DNA (483bp) protein (161aa)
UspA domain-containing protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCD0_HALXS
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEH38388.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strai
sw_5_scaffold_624_6
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4332..5087
DNA (756bp) protein (252aa)
Selenocysteine synthase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DYK8_9EURY
Selenocysteine synthase {ECO:0000313|EMBL:ELZ40620.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
selenocysteine synthase
sw_5_scaffold_624_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5057..5503
DNA (447bp) protein (149aa)
Selenocysteine synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAW0_9EURY
Selenocysteine synthase {ECO:0000313|EMBL:ELZ32620.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
selenocysteine synthase
sw_5_scaffold_624_8
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5570..6526)
DNA (957bp) protein (319aa)
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVI7_HALBP
theronine dehydrogenase
Theronine dehydrogenase {ECO:0000313|EMBL:ELY28701.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_5_scaffold_624_9
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6528..6908)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVI5_HALBP
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADQ68869.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_5_scaffold_624_10
unknown

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comp(7034..7255)
DNA (222bp) protein (74aa)

This feature has no annotations

sw_5_scaffold_624_11

Not on your lists

comp(7413..8201)
DNA (789bp) protein (263aa)
Bacteriorhodopsin n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y792_9ARCH
Bacteriorhodopsin {ECO:0000313|EMBL:ESS06917.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
bopI; bacteriorhodopsin precursor (Squarebop I)
sw_5_scaffold_624_12
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8427..8774
DNA (348bp) protein (116aa)
Small CPxCG-related zinc finger protein n=1 Tax=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) RepID=B0R5N2_HALS3
hypothetical protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CAP14049.2}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacte
sw_5_scaffold_624_13
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8906..11077
DNA (2172bp) protein (724aa)
AAA ATPase (EC:3.6.1.3)
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AEH60259.1}; EC=3.6.1.3 {ECO:0000313|EMBL:AEH60259.1};; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosa
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPD2_METZD
sw_5_scaffold_624_14
unknown

Not on your lists

comp(11079..11345)
DNA (267bp) protein (89aa)

This feature has no annotations

sw_5_scaffold_624_15
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11697..12350)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PLP6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA69670.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
sw_5_scaffold_624_16

Not on your lists

comp(12398..12901)
DNA (504bp) protein (168aa)
Cell division inhibitor n=1 Tax=Halobacterium sp. DL1 RepID=G4IIA8_9EURY
Cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:AEN06764.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_624_17
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13259..13687
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C9X4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20015.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_5_scaffold_624_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13739..15682
DNA (1944bp) protein (648aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
hypothetical protein id=24614393 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
hypothetical protein
sw_5_scaffold_624_19
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

15742..16536
DNA (795bp) protein (265aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;"
tRNA-splicing ligase RtcB n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QB73_9EURY
rtcB_1; rtcB-like protein
sw_5_scaffold_624_20
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16576..17967)
DNA (1392bp) protein (464aa)
Branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QVD3_9RHIZ
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:ESR23727.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.
branched-chain amino acid ABC transporter,ATP-binding protein
sw_5_scaffold_624_21
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18037..19428)
DNA (1392bp) protein (464aa)
Extracellular ligand-binding receptor n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PL25_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EMA70727.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aiding
ABC-type branched-chain amino acid transport system, periplasmic component
sw_5_scaffold_624_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20250..21149
DNA (900bp) protein (300aa)
Inner-membrane translocator n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9C5_CONWI
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADB49092.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter
sw_5_scaffold_624_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21146..22063
DNA (918bp) protein (306aa)
ABC transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQK4_9EURY
ABC transporter {ECO:0000313|EMBL:EMA47004.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ABC transporter
sw_5_scaffold_624_24
unknown

Not on your lists

comp(22018..22854)
DNA (837bp) protein (279aa)

This feature has no annotations

sw_5_scaffold_624_25
unknown

Not on your lists

23126..23287
DNA (162bp) protein (54aa)

This feature has no annotations

sw_5_scaffold_624_26
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23284..23454
DNA (171bp) protein (57aa)
Dehydrogenase {ECO:0000313|EMBL:ERG89389.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
short-chain dehydrogenase/reductase SDR id=24656044 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
sw_5_scaffold_624_27
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23451..23687
DNA (237bp) protein (79aa)
Dehydrogenase (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MIZ1_9EURY
Dehydrogenase {ECO:0000313|EMBL:ERG89389.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
sw_5_scaffold_624_28
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23684..23878
DNA (195bp) protein (65aa)
Dehydrogenase {ECO:0000313|EMBL:ERG89389.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
short-chain dehydrogenase/reductase SDR id=24656044 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
sw_5_scaffold_624_29
unknown

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comp(23935..24657)
DNA (723bp) protein (241aa)

This feature has no annotations

sw_5_scaffold_624_30
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(24955..26088)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJG4_9EURY
putative sorbitol dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
alcohol dehydrogenase
Displaying items 1-30 of 41 in total

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