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sw_5_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_66_1
unknown

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)

This feature has no annotations

sw_5_scaffold_66_2
unknown

Not on your lists

575..1387
DNA (813bp) protein (271aa)

This feature has no annotations

sw_5_scaffold_66_3
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1374..2393
DNA (1020bp) protein (340aa)
Radical SAM domain-containing protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LTK4_9ACTO
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:AGL18590.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N90
sw_5_scaffold_66_4
unknown

Not on your lists

2864..3007
DNA (144bp) protein (48aa)

This feature has no annotations

sw_5_scaffold_66_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2951..4078)
DNA (1128bp) protein (376aa)
dinP; DNA polymerase IV, damage-inducible protein P (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000313|EMBL:CBH22754.1};; TaxID=761659 species="
DNA polymerase IV n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4B4_SALRM
sw_5_scaffold_66_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4227..5381)
DNA (1155bp) protein (385aa)
UmuC protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYM0_SALRD
umuC protein
UmuC protein {ECO:0000313|EMBL:ABC46386.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain D
sw_5_scaffold_66_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5468..6001)
DNA (534bp) protein (178aa)
UmuD protein {ECO:0000313|EMBL:CBH23301.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBH23301.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
UmuD protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5J6_SALRM
umuD; umuD protein
sw_5_scaffold_66_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6984..8330
DNA (1347bp) protein (449aa)
Outer membrane efflux protein n=2 Tax=Rhodothermus marinus RepID=D0MF77_RHOM4
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACY49333.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
sw_5_scaffold_66_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8375..9565
DNA (1191bp) protein (397aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGY7_RHOMR
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEN74351.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sourc
sw_5_scaffold_66_10
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9637..13077
DNA (3441bp) protein (1147aa)
Cation efflux system protein CusA n=1 Tax=Alteromonas macleodii (strain Black Sea 11) RepID=K0D3Y0_ALTMS
heavy metal efflux pump, CzcA family; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=RBG_16_Betaproteobacteria_56_24_curated
cation efflux system protein CusA
sw_5_scaffold_66_11
unknown

Not on your lists

13164..13379
DNA (216bp) protein (72aa)

This feature has no annotations

sw_5_scaffold_66_12
unknown

Not on your lists

13395..13616
DNA (222bp) protein (74aa)

This feature has no annotations

sw_5_scaffold_66_13
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13931..14248
DNA (318bp) protein (106aa)
Multicopper oxidase type 3 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DEC1_HALXS
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:AEH39403.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DS
sw_5_scaffold_66_14
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14255..14392
DNA (138bp) protein (46aa)
Multicopper oxidase type 3 n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NX21_9EURY
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:EMA70710.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13
sw_5_scaffold_66_15
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14560..14802
DNA (243bp) protein (81aa)
Multicopper oxidase type 3 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DEC1_HALXS
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:AEH39403.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DS
sw_5_scaffold_66_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14804..15376
DNA (573bp) protein (191aa)
Multicopper oxidase type 3 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIG4_RHOM4
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:ACY48272.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sou
sw_5_scaffold_66_17
unknown

Not on your lists

15568..15735
DNA (168bp) protein (56aa)

This feature has no annotations

sw_5_scaffold_66_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15982..16650)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW33_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22862.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_5_scaffold_66_19
unknown

Not on your lists

comp(16712..16903)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_5_scaffold_66_20
unknown

Not on your lists

17763..18179
DNA (417bp) protein (139aa)

This feature has no annotations

sw_5_scaffold_66_21
unknown

Not on your lists

18176..18313
DNA (138bp) protein (46aa)

This feature has no annotations

sw_5_scaffold_66_22
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18895..19038
DNA (144bp) protein (48aa)
type II restriction endonuclease n=1 Tax=Salisaeta longa RepID=UPI0003B507C9
sw_5_scaffold_66_23
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19285..20106)
DNA (822bp) protein (274aa)
Integrase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SBE4_9BACL
Integrase {ECO:0000313|EMBL:EHQ63627.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
integrase protein
sw_5_scaffold_66_24
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20188..20610)
DNA (423bp) protein (141aa)
integrase Tax=RBG_16_Elusimicrobia_66_12_curated
Putative Integrase id=3285648 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
sw_5_scaffold_66_25
unknown

Not on your lists

comp(20607..20831)
DNA (225bp) protein (75aa)

This feature has no annotations

sw_5_scaffold_66_26
unknown

Not on your lists

21003..21140
DNA (138bp) protein (46aa)

This feature has no annotations

sw_5_scaffold_66_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22335..23414)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW29_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22858.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_5_scaffold_66_28
unknown

Not on your lists

comp(23641..24333)
DNA (693bp) protein (231aa)

This feature has no annotations

sw_5_scaffold_66_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24581..26725)
DNA (2145bp) protein (715aa)
Uncharacterized protein {ECO:0000313|EMBL:CBH22859.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_5_scaffold_66_30
unknown

Not on your lists

27019..27279
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

View Taxonomy