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sw_5_scaffold_688

Search features with annotation key words

Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_688_1
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1226)
DNA (1224bp) protein (408aa)
Polysaccharide biosynthesis protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GJW8_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ELZ71149.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense
polysaccharide biosynthesis protein
sw_5_scaffold_688_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1429..1914)
DNA (486bp) protein (162aa)
TRAM domain-containing protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KKS1_HALAR
deoxyribonuclease/rho motif-related TRAM
TRAM domain-containing protein {ECO:0000313|EMBL:EMA20774.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
sw_5_scaffold_688_3
unknown

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comp(1927..2427)
DNA (501bp) protein (167aa)

This feature has no annotations

sw_5_scaffold_688_4
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2523..3677
DNA (1155bp) protein (385aa)
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:ELY27495.1}; EC=6.3.4.21 {ECO:0000313|EMBL:ELY27495.1};; Nicotinic acid phosphoribosyltransferase {ECO:0000313|EMBL:ADQ66008.1}; TaxID=469382 spe
Nicotinate phosphoribosyltransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NKW2_HALBP
nicotinic acid phosphoribosyltransferase
sw_5_scaffold_688_5
unknown

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3704..4096
DNA (393bp) protein (131aa)

This feature has no annotations

sw_5_scaffold_688_6
unknown

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comp(4098..4292)
DNA (195bp) protein (65aa)

This feature has no annotations

sw_5_scaffold_688_7
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4346..4816)
DNA (471bp) protein (157aa)
XRE family transcriptional regulator; K03627 putative transcription factor id=24614312 bin=Halobonum_tyrrellensis species=Halorubrum aidingense genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
XRE family transcriptional regulator {ECO:0000313|EMBL:AKH98030.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanae
hypothetical protein
sw_5_scaffold_688_8
unknown

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comp(4909..5328)
DNA (420bp) protein (140aa)

This feature has no annotations

sw_5_scaffold_688_9

Not on your lists

5675..6370
DNA (696bp) protein (232aa)
ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZV73_9ARCH
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archa
sw_5_scaffold_688_10
unknown

Not on your lists

comp(6436..6639)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_5_scaffold_688_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6731..7393)
DNA (663bp) protein (221aa)
phosphodiesterase, MJ0936 family id=24649430 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Phosphoesterase, MJ0936 family {ECO:0000313|EMBL:ERH10525.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
phosphodiesterase, MJ0936 family
sw_5_scaffold_688_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7490..8707
DNA (1218bp) protein (406aa)
ATPase AAA n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMF7_HALBP
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:ELY27901.1}; ATPase family protein associated with various cellular activities (AAA) {ECO:0000313|EMBL:ADQ68455.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Eurya
sw_5_scaffold_688_13
Halovirus HCTV-2, Viruses

Not on your lists

8714..10885
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Halovirus HCTV-2 RepID=R4THQ9_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AGM11846.1}; TaxID=1273747 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.;" sour
sw_5_scaffold_688_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10939..11712
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9I7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54612.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
CAAX amino terminal protease family protein
sw_5_scaffold_688_15
unknown

Not on your lists

comp(11695..12123)
DNA (429bp) protein (143aa)

This feature has no annotations

sw_5_scaffold_688_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12127..13113)
DNA (987bp) protein (329aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
flap endonuclease 1 (EC:3.1.-.-)
Flap endonuclease 1 n=1 Tax=Halogranum salarium B-1 RepID=J3A0L0_9EURY
sw_5_scaffold_688_17
unknown

Not on your lists

13206..13706
DNA (501bp) protein (167aa)

This feature has no annotations

sw_5_scaffold_688_18

Not on your lists


13813..15186
DNA (1374bp) protein (458aa)
Signal recognition particle 54 kDa protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHK1_9ARCH
Signal recognition 54 kDa protein
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_688_19
unknown

Not on your lists

15238..15570
DNA (333bp) protein (111aa)

This feature has no annotations

sw_5_scaffold_688_20
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15690..16232
DNA (543bp) protein (181aa)
Metallophosphoesterase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YAF1_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:ELY71034.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
probable phosphoesterase
Displaying 20 items

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