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sw_5_scaffold_699

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_699_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..720
DNA (720bp) protein (240aa)
IS1341-type transposase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIH4_HALMO
IS1341-type transposase {ECO:0000313|EMBL:EMA45158.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
tnp4; IS1341-type transposase
sw_5_scaffold_699_2
RLO_PLX_64_10, Bacteria

Not on your lists

717..1523
DNA (807bp) protein (269aa)
mandelate racemase/muconate lactonizing protein; K01684 galactonate dehydratase [EC:4.2.1.6] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8S1Z5_9CLOT
putative mandelate racemase / muconate lactonizing enzyme
sw_5_scaffold_699_3
unknown

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comp(1493..1690)
DNA (198bp) protein (66aa)

This feature has no annotations

sw_5_scaffold_699_4
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1818..2765
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MNA8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47136.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_5_scaffold_699_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2851..3612
DNA (762bp) protein (254aa)
PurE family protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LKU0_HALWC
purE2; PurE family protein
PurE family protein {ECO:0000313|EMBL:CCC40048.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain DSM
sw_5_scaffold_699_6

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comp(3662..4450)
DNA (789bp) protein (263aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=uncultured archaeon A07HB70 RepID=V4XYE6_9ARCH
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:ESS05276.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.
binding-protein-dependent transport systems inner membrane component
sw_5_scaffold_699_7

Not on your lists

comp(4450..5253)
DNA (804bp) protein (268aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y2V3_9ARCH
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:ESS05277.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.
binding-protein-dependent transporters inner membrane component
sw_5_scaffold_699_8

Not on your lists

comp(5250..6107)
DNA (858bp) protein (286aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=uncultured archaeon A07HB70 RepID=V4XSW7_9ARCH
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:ESS05278.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
ABC transporter ATP-binding protein
sw_5_scaffold_699_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6179..7141)
DNA (963bp) protein (321aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=24632665 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ERG94438.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
sw_5_scaffold_699_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7338..8150
DNA (813bp) protein (271aa)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000256|PIRNR:PIRNR006250}; EC=2.4.2.19 {ECO:0000256|PIRNR:PIRNR006250};; Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
nicotinate-nucleotide pyrophosphorylase id=24619096 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
sw_5_scaffold_699_11
unknown

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8241..8369
DNA (129bp) protein (43aa)

This feature has no annotations

sw_5_scaffold_699_12
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8467..8901
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1J3_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB63240.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_5_scaffold_699_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9278..9547)
DNA (270bp) protein (90aa)
Major facilitator superfamily transporter n=2 Tax=Haladaptatus paucihalophilus RepID=E7QX45_9EURY
Major facilitator superfamily transporter {ECO:0000313|EMBL:EFW90848.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
sugar transporter
sw_5_scaffold_699_14
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10133..11248)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V721_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV44613.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_5_scaffold_699_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11704..12666
DNA (963bp) protein (321aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUP7_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EFW91704.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladap
zn-dependent oxidoreductase, NADph:quinone reductase
sw_5_scaffold_699_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12872..13579
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQK3_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66691.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
sw_5_scaffold_699_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13631..14482
DNA (852bp) protein (284aa)
Xylose isomerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWJ2_9EURY
Xylose isomerase {ECO:0000313|EMBL:EMA50092.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
xylose isomerase
sw_5_scaffold_699_18
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14568..15356)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PID9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA69688.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
uracil-DNA glycosylase
sw_5_scaffold_699_19
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15504..16514
DNA (1011bp) protein (337aa)
Carboxyl transferase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LTD7_HALLT
carboxyl transferase
Carboxyl transferase {ECO:0000313|EMBL:ACM58109.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain AT
sw_5_scaffold_699_20
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16474..17004
DNA (531bp) protein (177aa)
pccB; propionyl-CoA carboxylase carboxyltransferase component (EC:6.4.1.3) id=24630770 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:ERG93070.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
accA; acetyl-CoA carboxylase alpha subunit
Displaying 20 items

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