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sw_5_scaffold_751

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_751_1
unknown

Not on your lists

comp(2..262)
DNA (261bp) protein (87aa)

This feature has no annotations

sw_5_scaffold_751_trna_1
unknown

Not on your lists

595..678
DNA (84bp)
transferRNA
sw_5_scaffold_751_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1081..1380
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INY9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50163.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_751_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1459..2796
DNA (1338bp) protein (446aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PL68_9EURY
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ERG92966.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
amino acid/amide ABC transporter substrate-binding protein, haat family
sw_5_scaffold_751_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2816..3622)
DNA (807bp) protein (269aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y284_NATM8
livF1; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36590.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_5_scaffold_751_5
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3622..4647)
DNA (1026bp) protein (342aa)
Putative branched-chain amino acids ABC transporter ATP-binding protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HD77_9EURY
Putative branched-chain amino acids ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ94229.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofe
livG4; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_5_scaffold_751_6
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4640..6052)
DNA (1413bp) protein (471aa)
Putative branched-chain amino acids ABC transporter permease n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IR22_9EURY
Putative branched-chain amino acids ABC transporter permease {ECO:0000313|EMBL:ELZ99306.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sour
livM; ABC-type branched-chain amino acid transport system, permease protein II
sw_5_scaffold_751_7
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6049..7194)
DNA (1146bp) protein (382aa)
ABC-type branched-chain amino acid transport system, permease protein I n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H2B9_9EURY
ABC-type branched-chain amino acid transport system, permease protein I {ECO:0000313|EMBL:ELZ78630.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
livH; ABC-type branched-chain amino acid transport system, permease protein I
sw_5_scaffold_751_8
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7316..8572
DNA (1257bp) protein (419aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1227500 species="Archaea;
Phosphoglycerate kinase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WRU9_9EURY
3-phosphoglycerate kinase
sw_5_scaffold_751_9

Not on your lists

8572..9135
DNA (564bp) protein (188aa)
Acetyltransferase n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZJP4_9ARCH
Acetyltransferase {ECO:0000313|EMBL:ESS02520.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
GCN5-related N-acetyltransferase
sw_5_scaffold_751_trna_2
unknown

Not on your lists

9183..9256
DNA (74bp)
transferRNA
sw_5_scaffold_751_10
unknown

Not on your lists

9787..10029
DNA (243bp) protein (81aa)

This feature has no annotations

sw_5_scaffold_751_11
unknown

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10534..10668
DNA (135bp) protein (45aa)

This feature has no annotations

sw_5_scaffold_751_12
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10944..11999
DNA (1056bp) protein (352aa)
Endonuclease n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J5Q1_9EURY
Endonuclease {ECO:0000313|EMBL:EMA03678.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.;"
comA; endonuclease
sw_5_scaffold_751_13
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12246..12680)
DNA (435bp) protein (145aa)
nucleoside 2-deoxyribosyltransferase id=24655914 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:ERG89288.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_5_scaffold_751_14
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

13264..13956
DNA (693bp) protein (231aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Volvox carteri RepID=D8ULE3_VOLCA
Putative uncharacterized protein {ECO:0000313|EMBL:EFJ39454.1}; Flags: Fragment;; TaxID=3067 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox.;" so
Pre-mRNA processing ribonucleoprotein, binding domain protein
sw_5_scaffold_751_15
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14121..14240
DNA (120bp) protein (40aa)
short-chain dehydrogenase/reductase SDR id=24656044 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Dehydrogenase {ECO:0000313|EMBL:ERG89389.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_5_scaffold_751_16
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14428..14757)
DNA (330bp) protein (110aa)
Cupin domain protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1QR08_9EURY
Cupin domain protein {ECO:0000313|EMBL:ERH08122.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
cupin 2 barrel domain protein
sw_5_scaffold_751_17
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15028..15870)
DNA (843bp) protein (281aa)
hypothetical protein id=24656045 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89390.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_5_scaffold_751_18
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15956..16621)
DNA (666bp) protein (222aa)
cyclase family protein id=24624483 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Putative metal-dependent hydrolase {ECO:0000313|EMBL:ERG99877.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp.
hypothetical protein
sw_5_scaffold_751_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16714..17142)
DNA (429bp) protein (143aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDF9_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
transcription elongation factor NusA-like protein
sw_5_scaffold_751_20
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17161..18978)
DNA (1818bp) protein (606aa)
rpoA2; DNA-directed RNA polymerase subunit A'' (subunit C) (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=24629693 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
rpoA2; DNA-directed RNA polymerase subunit A'' (subunit C) (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:ERG93485.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum
sw_5_scaffold_751_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18971..20362)
DNA (1392bp) protein (464aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTQ8_9EURY
DNA-directed RNA polymerase subunit A''
Displaying 23 items

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